Pairwise Alignments

Query, 323 a.a., ABC transporter, membrane spanning protein (sugar/ribonucleotide) from Agrobacterium fabrum C58

Subject, 307 a.a., Nucleoside ABC transporter, permease protein 2 from Variovorax sp. SCN45

 Score =  157 bits (398), Expect = 2e-43
 Identities = 100/309 (32%), Positives = 152/309 (49%), Gaps = 20/309 (6%)

Query: 13  STVRLTIPLLFTALAGLFSERAGVFDIGLEGKMLAAAFASACVAYLTANPWAGLLAGIGV 72
           + +R+  PL+   L  L  ERAGV ++G+EG M+A AF      Y  A  W G+      
Sbjct: 16  AVLRIATPLILGTLGVLLCERAGVLNLGIEGIMVAGAFTGWLAVYAGAPLWVGVGVAALT 75

Query: 73  SILFSLIHGFAVITNRGNQIVSGVALNFIAAGLTVVLGQAWFGQGGRTPQLPGEGRFAPI 132
            ++F L+H F  +    +Q VSG+ +  +A  L+      +FG     P++       P 
Sbjct: 76  GMVFGLLHAFLTVGLALSQHVSGLGITLLATALS------YFGYRVSFPKV----NTPPT 125

Query: 133 ILPGADAMREVPFIGPLYANVISGNNILTYLAFLAVPLSWWVLYRTRFGLRLRAVGENPG 192
           I P A        +  L   +++    LT  A L VP+  WVLYRT  GL LR  GENP 
Sbjct: 126 ITPFAP-------MDWLPVPILNAQTALTLFALLLVPVVGWVLYRTPLGLALRMAGENPQ 178

Query: 193 AVDTAGISVTWMRYRAVIVAGFLCGFSGAYLAVAQSAAFIANMSAGKGYIALAALIFAKW 252
           A ++ G+SV   R  A++    L G +G++L ++   AF  NM  G+G+I +A ++FA W
Sbjct: 179 AAESQGVSVAATRTGAIVAGSALMGMAGSFLTLSAFNAFFFNMVNGRGWICVALVVFASW 238

Query: 253 KPVPVMFACLLFGFLDAFANFMQGKSVPGIGEVPVQIFQAMPYILTCILLAGFIGVAKPP 312
           +P   +   LLF F DA    +Q     G   +P Q++  +PY+L+ + L      A  P
Sbjct: 239 RPGKALLGALLFAFFDALQLRLQQS---GDAVLPYQLYLMLPYLLSILALVLVARKASYP 295

Query: 313 KAGGVAYAK 321
           +A    Y K
Sbjct: 296 QALMKPYRK 304