Pairwise Alignments
Query, 501 a.a., ABC transporter, nucleotide binding/ATPase protein (sugar/ribonucleotide) from Agrobacterium fabrum C58
Subject, 517 a.a., nucleoside ABC transporter ATP-binding protein from Pseudomonas syringae pv. syringae B728a ΔmexB
Score = 302 bits (773), Expect = 2e-86
Identities = 187/484 (38%), Positives = 277/484 (57%), Gaps = 18/484 (3%)
Query: 5 IELMGIDKKFGAVHANKNINLSVAKGTIHGIIGENGAGKSTLMSILYGFYQADAGEIRVN 64
++L I K++ AN ++L++ G IH ++GENGAGKSTLM I+YG Q DAG I
Sbjct: 10 LQLRHITKRYPGCLANDAVDLTIQPGEIHALLGENGAGKSTLMKIIYGVTQPDAGTIIWQ 69
Query: 65 GKPVTIRDSQAAISAGIGMVHQHFMLVENFTVLENVMLGAEGGALLARGRAGARREL--- 121
G+ T+R+ A S GIGMV QHF L E +V +N+ L A G A AG ++L
Sbjct: 70 GQAQTMRNPAQARSLGIGMVFQHFSLFETLSVAQNIAL-AMGAA------AGTPKQLEPR 122
Query: 122 -KRLEDDYGLEVDPDAVIEELPVGLQQRVEILKAMYRGAEILILDEPTGVLTPAEADHLF 180
+ + YG+ V+P ++ L +G +Q+VEI++ + + +LILDEPT VLTP EA+ LF
Sbjct: 123 IREVSQRYGMAVEPQRLVHSLSIGERQKVEIIRCLMQDIRLLILDEPTSVLTPQEAEELF 182
Query: 181 KILGVLREQGKTIILITHKLREIMAITDSVSVMRRGEMVATRKTSETSVEELAELMVGRR 240
L L +G +I+ I+HKL E+ A+ S +V+R G++ ++ S ELA LMVG
Sbjct: 183 VTLRHLAREGCSILFISHKLGEVRALCHSATVLRNGKVSGHCIPADCSDLELARLMVGDA 242
Query: 241 VLLRVEKGETTPGDVLLSIRNLT--VKDSRGVTMVDDVSLDVRAGEIVGIAGVAGNGQSE 298
L + + L I L+ D G ++ D+SL+VR+GEIVGIAGVAGNGQ E
Sbjct: 243 EGLTAHYEKVSGSTAFLRIDKLSWHNPDPFGCSL-KDLSLEVRSGEIVGIAGVAGNGQDE 301
Query: 299 LLEAIAG---IRKPYSGEIWVDGQKVDRPDPAILRKLGLAHIPEDRHHMGLVLKFEEYEN 355
LL ++G + + + + V P RK GLA +P +R G V + +N
Sbjct: 302 LLALLSGEQTLPHAQAATLRFEDAPVGNLRPDARRKRGLAFVPAERLGHGAVPELSLADN 361
Query: 356 SILGYHHDERYGKGPFLNPEAIRKDAVEKIEKYDIRPPNPQLKTANFSGGNQQKIVVARE 415
++L G + +R A E I ++ ++ P+ Q + SGGN QK ++ RE
Sbjct: 362 ALLTAFQQGLVSNG-LIQRSKVRALADEIIRRFAVKTPDAQAPARSLSGGNLQKFILGRE 420
Query: 416 IERDPKMLIIGQPTRGVDIGAIEFIHRRIIEMRDAGKAILLVSVELDEIRSLSDRIMVMF 475
I + PK+LI PT GVD+GA IHR +I +RDAG AIL++S +LDE+ +SDR+ +
Sbjct: 421 ILQKPKLLIAAHPTWGVDVGAAAAIHRALIALRDAGAAILVISEDLDELFQISDRLAALS 480
Query: 476 AGRV 479
G++
Sbjct: 481 GGQL 484
Score = 70.1 bits (170), Expect = 2e-16
Identities = 65/245 (26%), Positives = 111/245 (45%), Gaps = 13/245 (5%)
Query: 257 LSIRNLTVKDSRGVTMVDDVSLDVRAGEIVGIAGVAGNGQSELLEAIAGIRKPYSGEIWV 316
L +R++T K G D V L ++ GEI + G G G+S L++ I G+ +P +G I
Sbjct: 10 LQLRHIT-KRYPGCLANDAVDLTIQPGEIHALLGENGAGKSTLMKIIYGVTQPDAGTIIW 68
Query: 317 DGQKVDRPDPAILRKLGLAHIPEDRHHMGLVLKFEEYENSILGYHHDERYGKGPFLNPEA 376
GQ +PA R LG+ + + H L +N L P+
Sbjct: 69 QGQAQTMRNPAQARSLGIGMVFQ---HFSLFETLSVAQNIALAMGAAAG-------TPKQ 118
Query: 377 IRKDAVEKIEKYDIRPPNPQLKTANFSGGNQQKIVVAREIERDPKMLIIGQPTRGVDIGA 436
+ E ++Y + PQ + S G +QK+ + R + +D ++LI+ +PT +
Sbjct: 119 LEPRIREVSQRYGMAV-EPQRLVHSLSIGERQKVEIIRCLMQDIRLLILDEPTSVLTPQE 177
Query: 437 IEFIHRRIIEMRDAGKAILLVSVELDEIRSLSDRIMVMFAGRVVGE-KTAEAEEQTLGLM 495
E + + + G +IL +S +L E+R+L V+ G+V G A+ + L +
Sbjct: 178 AEELFVTLRHLAREGCSILFISHKLGEVRALCHSATVLRNGKVSGHCIPADCSDLELARL 237
Query: 496 MAGIA 500
M G A
Sbjct: 238 MVGDA 242
Score = 60.8 bits (146), Expect = 1e-13
Identities = 56/230 (24%), Positives = 104/230 (45%), Gaps = 12/230 (5%)
Query: 21 KNINLSVAKGTIHGIIGENGAGKSTLMSILYG---FYQADAGEIRVNGKPVTIRDSQAAI 77
K+++L V G I GI G G G+ L+++L G A A +R PV A
Sbjct: 277 KDLSLEVRSGEIVGIAGVAGNGQDELLALLSGEQTLPHAQAATLRFEDAPVGNLRPDARR 336
Query: 78 SAGIGMVHQHFM---LVENFTVLENVMLGAEGGALLARGRAGARRELKRLEDD----YGL 130
G+ V + V ++ +N +L A L++ G R +++ L D+ + +
Sbjct: 337 KRGLAFVPAERLGHGAVPELSLADNALLTAFQQGLVSNGLI-QRSKVRALADEIIRRFAV 395
Query: 131 EV-DPDAVIEELPVGLQQRVEILKAMYRGAEILILDEPTGVLTPAEADHLFKILGVLREQ 189
+ D A L G Q+ + + + + ++LI PT + A + + L LR+
Sbjct: 396 KTPDAQAPARSLSGGNLQKFILGREILQKPKLLIAAHPTWGVDVGAAAAIHRALIALRDA 455
Query: 190 GKTIILITHKLREIMAITDSVSVMRRGEMVATRKTSETSVEELAELMVGR 239
G I++I+ L E+ I+D ++ + G++ T +TS ++ M G+
Sbjct: 456 GAAILVISEDLDELFQISDRLAALSGGQLSELIPTEQTSTVQIGGWMAGQ 505