Pairwise Alignments

Query, 501 a.a., ABC transporter, nucleotide binding/ATPase protein (sugar/ribonucleotide) from Agrobacterium fabrum C58

Subject, 512 a.a., ribose ABC transporter - ATP-binding subunit from Pseudomonas putida KT2440

 Score =  285 bits (730), Expect = 2e-81
 Identities = 183/500 (36%), Positives = 267/500 (53%), Gaps = 13/500 (2%)

Query: 3   PAIELMGIDKKFGAVHANKNINLSVAKGTIHGIIGENGAGKSTLMSILYGFYQADAGEIR 62
           P +EL GI K FGA  A    +L VA G++HG++GENGAGKSTL+ +L G ++ DAG + 
Sbjct: 4   PVLELRGIVKTFGATRALDGASLRVAAGSVHGLVGENGAGKSTLIKVLAGIHRPDAGSLL 63

Query: 63  VNGKPVTIRDSQAAISAGIGMVHQHFMLVENFTVLENVMLGAEG--GALLARGRAGARRE 120
           ++G+P      +     GIG +HQ  +L   FTV E +  G E   G LL   R   +RE
Sbjct: 64  LDGQPHGHFSPRQVERLGIGFIHQERLLPARFTVGEALFFGHERRFGPLL--DRRSQQRE 121

Query: 121 LKRLEDDY-GLEVDPDAVIEELPVGLQQRVEILKAMYRGAEILILDEPTGVLTPAEADHL 179
             RL DDY GL +  +A+I EL    QQ V+I++A+     +L+ DEP+  L   E + L
Sbjct: 122 AARLLDDYFGLRLPANALIGELSSAEQQMVQIVRALLIKPRVLVFDEPSVALVQREVERL 181

Query: 180 FKILGVLREQGKTIILITHKLREIMAITDSVSVMRRGEMVATRKTSETSVEELAELMVGR 239
            +I+  LR+ G  I+ I+H L+EI A+ D V+V+R G  VA      TS+E++  LMV R
Sbjct: 182 LRIVQRLRDDGLAIVYISHYLQEIEALCDRVTVLRNGRDVAEVSPRNTSLEQITRLMVNR 241

Query: 240 RVLLRVEKGETTPGDVLLSIRNLTVKDSRGVTMVDDVSLDVRAGEIVGIAGVAGNGQSEL 299
            V     K     G +LL +R L             + L VR GEIVG+ G+ G+G  EL
Sbjct: 242 EVGELYPKVAVPAGALLLDVRGL-----GRARAYQGIDLQVRRGEIVGLTGLVGSGAKEL 296

Query: 300 LEAIAGIRKPYSGEIWVDGQKVDRPDPAILRKLGLAHIPEDRHHMGLVLKFEEYENSILG 359
           L ++ G+  P SGE+ +DGQ +    P      G+A +PE+R   G+ L     EN+ L 
Sbjct: 297 LRSLFGLAPPDSGEVRLDGQPLSLRSPREAVAQGVALMPEERRRQGVALDLSVQENTTLA 356

Query: 360 YHHDERYGKGPFLNPEAIRKDAVEKIEKYDIRPPNPQLKTANFSGGNQQKIVVAREIERD 419
                R+ +   L+P   R   +E IE+  I+      K    SGGNQQK+ +A+   R 
Sbjct: 357 AL--SRFVRLGLLSPARERHTTLELIERLRIKAHGAHAKVRQLSGGNQQKVALAKWFARC 414

Query: 420 PKMLIIGQPTRGVDIGAIEFIHRRIIEMRDAGKAILLVSVELDEIRSLSDRIMVMFAGRV 479
             + ++ +P+ G+D+GA   I+R I E+   G  +L++S +L E+  L DRI VM  G +
Sbjct: 415 SSLYLLDEPSVGIDVGAKVEIYRLIGELVKEGAGVLILSSDLPELIGLCDRIHVMHRGAI 474

Query: 480 VGEKTA-EAEEQTLGLMMAG 498
                A EA    L  +  G
Sbjct: 475 AARFAAGEANSDRLLAVATG 494