Pairwise Alignments

Query, 251 a.a., 3-deoxy-manno-octulosonate cytidylyltransferase from Agrobacterium fabrum C58

Subject, 253 a.a., 3-deoxy-D-manno-octulosonate cytidylyltransferase from Pseudomonas sp. S08-1

 Score =  160 bits (406), Expect = 2e-44
 Identities = 109/249 (43%), Positives = 140/249 (56%), Gaps = 16/249 (6%)

Query: 11  VLIPARMASTRLPGKPLADIGGRPMIVQVALRAREAGAERIVVAVDDEQVFAAVQNAGFD 70
           V+IPAR AS+RLPGKPL DI G+PM+  V  +A+++ A R+VVA DD ++  A Q  G +
Sbjct: 6   VVIPARYASSRLPGKPLQDIAGKPMVQHVWEQAKKSSATRVVVATDDARILEACQGFGAE 65

Query: 71  VMMTRGDHQSGSDRIFEALQKADPYGKAEYVINVQGDLPTIEAETI-RASLRPMENAAVD 129
           V+MTR DH SG+DR+ E   +      A  V+NVQGD P I    I + +     N+   
Sbjct: 66  VLMTRVDHNSGTDRLAEVATQLGLANDA-IVVNVQGDEPLIPPSIIDQVAANLAANSQAG 124

Query: 130 IATLTVEITDEEEKTNPNVVKVV-----------GSPLSETRLRALYFTRTTAPYGDGPL 178
           IATL   I D     NPNVVKVV            +PL+  R  A   +R   P G  P 
Sbjct: 125 IATLAEPIEDVTALFNPNVVKVVTDKSGLALTFSRAPLAWAR-DAFAKSRDALPEG-VPY 182

Query: 179 YHHIGLYTYRRAALETFVRLPPSPLELRERLEQLRALEAGMRID-AEIVRSVPLGVDTPH 237
             HIG+Y YR   L  FV   P  LE  E LEQLRAL  G+RI  A+ + +   GVDTP 
Sbjct: 183 RRHIGIYAYRAGFLHDFVAWGPCWLEDTECLEQLRALWHGVRIHVADALEAPAAGVDTPE 242

Query: 238 DLEKARKIL 246
           DLE+ R++L
Sbjct: 243 DLERVRRLL 251