Pairwise Alignments

Query, 251 a.a., 3-deoxy-manno-octulosonate cytidylyltransferase from Agrobacterium fabrum C58

Subject, 254 a.a., 3-deoxy-manno-octulosonate cytidylyltransferase from Pseudomonas fluorescens SBW25

 Score =  159 bits (401), Expect = 7e-44
 Identities = 107/251 (42%), Positives = 138/251 (54%), Gaps = 20/251 (7%)

Query: 11  VLIPARMASTRLPGKPLADIGGRPMIVQVALRAREAGAERIVVAVDDEQVFAAVQNAGFD 70
           V+IP+R ASTRLPGKPL  IG +PMI  V  +A ++ AER+VVA DD ++  A Q  G +
Sbjct: 7   VVIPSRYASTRLPGKPLQLIGDKPMIQLVWEQACKSSAERVVVATDDPRIIEACQGFGAE 66

Query: 71  VMMTRGDHQSGSDRIFEALQKADPYGKAEYVINVQGDLPTIEAETI-RASLRPMENAAVD 129
            ++TR DH SG+DR+ E   K      A  V+NVQGD P I    I + +     +    
Sbjct: 67  AVLTREDHNSGTDRLAEVATKLGLAPDA-IVVNVQGDEPLIPPSVIDQVAANLAAHGEAR 125

Query: 130 IATLTVEITDEEEKTNPNVVKVVGSPLSETRLRALYFTRTTAPYGDG------------- 176
           +ATL   I D     NPNVVKVV    S+    AL F+R+T P+                
Sbjct: 126 MATLAEPIEDIATLFNPNVVKVV----SDINGLALTFSRSTLPWARDAFAKQPDVLPEGV 181

Query: 177 PLYHHIGLYTYRRAALETFVRLPPSPLELRERLEQLRALEAGMRID-AEIVRSVPLGVDT 235
           P   HIG+Y YR   L  FV   P  LE  E LEQLRAL  G+RI   + + + P GVDT
Sbjct: 182 PYRRHIGIYAYRAGFLHDFVSWGPCWLENTESLEQLRALWHGVRIHVGDALEAPPAGVDT 241

Query: 236 PHDLEKARKIL 246
           P DLE+ R++L
Sbjct: 242 PEDLERVRRLL 252