Pairwise Alignments

Query, 314 a.a., permease from Agrobacterium fabrum C58

Subject, 291 a.a., putative Membrane protein from Pseudomonas putida KT2440

 Score = 63.5 bits (153), Expect = 6e-15
 Identities = 80/318 (25%), Positives = 138/318 (43%), Gaps = 44/318 (13%)

Query: 2   SAVAANVAPIFILILIGWLTVKAGLLRADAGDILSDFVFKIAVPTLIFRTLAEANFHGAS 61
           +++ A +AP+FI+  IG+   + GL      D ++  V  +  P+L+  TL+       +
Sbjct: 3   ASLFAVLAPVFIVAGIGFAWARKGLDYPT--DFIARVVMTVGTPSLVLSTLSRTELDPNA 60

Query: 62  PFRLWITYFAGVAVT-------WAFGHIVTRYVFKQDVRIAVIAGISSAFANNIFIGLPL 114
                   F  VAV         A   ++         R+ + A +   F N   +GLP+
Sbjct: 61  --------FTSVAVACLLCTLGMALAALLVCRASGMHWRVLLPAFM---FPNTGNMGLPI 109

Query: 115 VGRSVGDEGLVALSILLAIHLPVMMIAGTILMENATHKAVGGEKRGMAAVFKQVGRNLVT 174
              + G+ GL   ++ +A  L + ++  TI M      A+ G    + A        L+ 
Sbjct: 110 SLYAFGEHGL---ALAVAFFLTLSIVQFTIGM------AISGTAASLKA--------LLR 152

Query: 175 NPLVIGLAIGLSTNVSGVALTPILKTVVDQVASMAGPAALISLGMALTKYTIRGNMGIAV 234
           NP+VI LA  +        L   L    D +  M  P  L++LG++L    +R ++G  +
Sbjct: 153 NPIVISLAGAMPIIFLDFELPRWLANTADLLGGMTIPLMLLTLGVSLASIRLR-HVGSGM 211

Query: 235 TMTVFKLLLLPACVWAMGHALGLSREWTAALVLTSSVPTGVNAWLIANRFGIGHSVAAST 294
            +   ++ L  A  WA+G  LG+     A L++ S++P  V  +L+A R        A+ 
Sbjct: 212 LLGGLRIGLGAAVGWAVGAVLGMDSLERAVLMVQSAMPVAVFNYLMAVRANREPEQVANL 271

Query: 295 ISISTATGVLSVSLWAWL 312
           +  ST   VLS   +AWL
Sbjct: 272 VMCST---VLS---FAWL 283