Pairwise Alignments

Query, 314 a.a., permease from Agrobacterium fabrum C58

Subject, 315 a.a., putative Membrane protein from Pseudomonas putida KT2440

 Score = 73.2 bits (178), Expect = 8e-18
 Identities = 75/318 (23%), Positives = 129/318 (40%), Gaps = 36/318 (11%)

Query: 9   APIFILILIGWLTVKAGLLRADAGDILSDFVFKIAVPTLIFRTLAEANFHGASPFRLWIT 68
           AP+F ++ +G L  +  L+  +   + S  VF + +P L+F  +  A+   A    + I 
Sbjct: 15  APVFAMLFMGVLLKRIHLIDDNFNRVASQLVFNVCMPALLFLGIYHADLAAAVKPGV-IL 73

Query: 69  YF-----AGVAVTWAFGHIVTRYVFKQDVRIAVIAGISSAFANNIFIGLPLVGRSVGDEG 123
           YF      G A+ W         +++  +    I    +   NN  IGL L     GD G
Sbjct: 74  YFIVATLVGFAIAWGMA------IWRSPMADRGIYTQGAFRGNNGVIGLALAASLYGDYG 127

Query: 124 LVALSILLAIHLPVMMIAGTILMENATHKAVGGEKRGMAAVFK--------QVGRNLVTN 175
           +   ++L  +          ILM N+    V        AV+          + +++ +N
Sbjct: 128 ISLGAVLAGL---------VILMYNSLSAVV-------LAVYSPDLKSDPWSICKSIFSN 171

Query: 176 PLVIGLAIGLSTNVSGVALTPILKTVVDQVASMAGPAALISLGMALTKYTIRGNMGIAVT 235
           PL+I + +        V L   L T  D +A M  P ALI +G  L+   +R    +A+ 
Sbjct: 172 PLIISVLVAAPMAYGQVPLPNWLLTSGDYLAQMTLPLALICIGGTLSLAALRNCGRLAID 231

Query: 236 MTVFKLLLLPACVWAMGHALGLSREWTAALVLTSSVPTGVNAWLIANRFGIGHSVAASTI 295
            +  K+L LP          G        L L    PT   ++++A      H +AAS I
Sbjct: 232 ASFVKMLWLPLLGTLGAWLCGFRGAELGILFLYIGSPTAAASYVMARAANGNHELAASII 291

Query: 296 SISTATGVLSVSLWAWLL 313
            I+T    ++ ++  ++L
Sbjct: 292 VITTLMAAITTNIGIFIL 309