Pairwise Alignments

Query, 260 a.a., ABC transporter, nucleotide binding/ATPase protein (sugar) from Agrobacterium fabrum C58

Subject, 516 a.a., ABC transporter, ATP-binding protein (cluster 2, ribose/xylose/arabinose/galactose) / ABC transporter, ATP-binding protein (cluster 2, ribose/xylose/arabinose/galactose) from Variovorax sp. SCN45

 Score =  155 bits (391), Expect = 2e-42
 Identities = 90/247 (36%), Positives = 143/247 (57%), Gaps = 13/247 (5%)

Query: 5   PILTARNLVKRYGRVTALDNADFDLYPGEILAVIGDNGAGKSSLIKAISGAVTPDEGEIR 64
           P+L  R++ K +G VT L +       G++ A+ G+NGAGKS+L+K + G   PD GEIR
Sbjct: 16  PLLEMRSIRKVFGAVTVLRDVSLQCRAGQVHAICGENGAGKSTLMKVLGGIHAPDGGEIR 75

Query: 65  LEGQPVQFRSPIEARKAGIETVYQNLALSPALSIADNMFLGREIRKPGIQGSLFRALDRP 124
           + G+PV+F  P  AR+AGI  ++Q LAL P  ++A N+FLG E  + G+       +DR 
Sbjct: 76  IGGRPVRFGHPSAARQAGIAIIHQELALLPHRTVAQNIFLGHEPSRWGV-------IDRK 128

Query: 125 AMEKFAREKLSELGLMTIQNINQAVE--TLSGGQRQGVAVARAAAFGSKVVILDEPTAAL 182
           AM   A   L  +G      I+   E   LS  ++Q V +A+A +  +++++LDEPTAAL
Sbjct: 129 AMNAGAEAALRRVGC----RIDPRTECGRLSVAEQQMVEIAKAVSLDARILVLDEPTAAL 184

Query: 183 GVKESRRVLELILDVRSRGLPIVLISHNMPHVFEVADRIHIHRLGKRLCVINPKDYSMSD 242
              ESR++ +LI ++R  G+ ++ ISH M  V  +AD I + + G+ +  +   + ++  
Sbjct: 185 DDVESRKLFDLIAELRRAGVAMLYISHRMAEVMALADDISVIKDGQLMATLPAAEATVER 244

Query: 243 AVAFMTG 249
            V  M G
Sbjct: 245 IVRLMVG 251



 Score = 59.7 bits (143), Expect = 1e-13
 Identities = 53/210 (25%), Positives = 89/210 (42%), Gaps = 8/210 (3%)

Query: 22  LDNADFDLYPGEILAVIGDNGAGKSSLIKAISGAVTPDEGEIRLEGQPVQFRSPIEARKA 81
           L   D  L+ GEI+ V G   +GK  L +A+ G      G +R        RSP EA + 
Sbjct: 281 LHGIDLRLHAGEIVGVAGLEASGKVELARALFGERRFTRGTVRAWDDKGAARSPREAARR 340

Query: 82  GIETVYQNL---ALSPALSIADNMFLGREIRKPGIQGSLFRALDRPAMEKFAREKLSELG 138
           GI  +  +     L    S+ DN  L        + G+   A  R  ++    +      
Sbjct: 341 GIGYLPDDRKREGLGLQQSLRDNAALTLRALAGPLAGAGSAARSRSLIDALLNKVE---- 396

Query: 139 LMTIQNINQAVETLSGGQRQGVAVARAAAFGSKVVILDEPTAALGVKESRRVLELILDVR 198
            +   + +  V  LSGG +Q V VAR  A   ++ ++ EPT  + V     +  L+    
Sbjct: 397 -VRAADFDMPVGALSGGNQQKVMVARWMAREPRLWVICEPTRGIDVGAKATIYRLLRAYA 455

Query: 199 SRGLPIVLISHNMPHVFEVADRIHIHRLGK 228
             G  ++++S ++  +  + DRI +  LG+
Sbjct: 456 DAGGAVLVVSSDVAEIIGLCDRICVMALGR 485