Pairwise Alignments

Query, 260 a.a., ABC transporter, nucleotide binding/ATPase protein (sugar) from Agrobacterium fabrum C58

Subject, 500 a.a., predicted sugar transporter subunit: ATP-binding component of ABC superfamily (NCBI) from Escherichia coli BW25113

 Score =  161 bits (407), Expect = 3e-44
 Identities = 90/224 (40%), Positives = 138/224 (61%), Gaps = 9/224 (4%)

Query: 4   EPILTARNLVKRYGRVTALDNADFDLYPGEILAVIGDNGAGKSSLIKAISGAVTPDEGEI 63
           + IL    L K +  V ALDN DF L  GEI+A++G+NGAGKS+LIKA++G    D G I
Sbjct: 7   QEILRTEGLSKFFPGVKALDNVDFSLRRGEIMALLGENGAGKSTLIKALTGVYHADRGTI 66

Query: 64  RLEGQPVQFRSPIEARKAGIETVYQNLALSPALSIADNMFLGREIRKPGIQGSLFRALDR 123
            LEGQ +  ++   A++ GI TVYQ + L P +S+ADN+F+GRE ++ G+       L R
Sbjct: 67  WLEGQAISPKNTAHAQQLGIGTVYQEVNLLPNMSVADNLFIGREPKRFGL-------LRR 119

Query: 124 PAMEKFAREKLSELGLMTIQNINQAVETLSGGQRQGVAVARAAAFGSKVVILDEPTAALG 183
             MEK A E ++  G     ++ + +   S   +Q VA+ RA    +KV+ILDEPTA+L 
Sbjct: 120 KEMEKRATELMASYGFSL--DVREPLNRFSVAMQQIVAICRAIDLSAKVLILDEPTASLD 177

Query: 184 VKESRRVLELILDVRSRGLPIVLISHNMPHVFEVADRIHIHRLG 227
            +E   + +L+  +R RG+ ++ ++H +  V++V+DRI + R G
Sbjct: 178 TQEVELLFDLMRQLRDRGVSLIFVTHFLDQVYQVSDRITVLRNG 221



 Score = 90.9 bits (224), Expect = 5e-23
 Identities = 62/223 (27%), Positives = 112/223 (50%), Gaps = 9/223 (4%)

Query: 14  KRYGRVTALDNADFDLYPGEILAVIGDNGAGKSSLIKAISGAVTPDEGEIRLEGQPVQFR 73
           K YG+   +   D ++ PGEI+ + G  G+G++   + I G    D G   ++G+P   R
Sbjct: 268 KNYGKKGTIAPFDLEVRPGEIVGLAGLLGSGRTETAEVIFGIKPADSGTALIKGKPQNLR 327

Query: 74  SPIEARKAGIETVYQNL---ALSPALSIADNMFLGREIRKPGIQGSLFRALDRPAMEKFA 130
           SP +A   GI    ++     +  A S+ +N+ L  + ++  +     R + R   ++ A
Sbjct: 328 SPHQASVLGIGFCPEDRKTDGIIAAASVRENIILALQAQRGWL-----RPISRKEQQEIA 382

Query: 131 REKLSELGLMTIQNINQAVETLSGGQRQGVAVARAAAFGSKVVILDEPTAALGVKESRRV 190
              + +LG+ T  +  Q +E LSGG +Q V ++R      + +ILDEPT  + V     +
Sbjct: 383 ERFIRQLGIRT-PSTEQPIEFLSGGNQQKVLLSRWLLTRPQFLILDEPTRGIDVGAHAEI 441

Query: 191 LELILDVRSRGLPIVLISHNMPHVFEVADRIHIHRLGKRLCVI 233
           + LI  + + GL +++IS  +  +   ADR+ I R  K++  I
Sbjct: 442 IRLIETLCADGLALLVISSELEELVGYADRVIIMRDRKQVAEI 484