Pairwise Alignments

Query, 260 a.a., ABC transporter, nucleotide binding/ATPase protein (sugar) from Agrobacterium fabrum C58

Subject, 515 a.a., sugar ABC transporter ATP-binding protein from Dickeya dianthicola ME23

 Score =  145 bits (367), Expect = 1e-39
 Identities = 88/260 (33%), Positives = 149/260 (57%), Gaps = 14/260 (5%)

Query: 4   EPILTARNLVKRYGRVTALDNADFDLYPGEILAVIGDNGAGKSSLIKAISGAVTPDEGEI 63
           EP+L   +L K +  V AL+     + PGEI A++G+NGAGKS+L+KA++GA     G+I
Sbjct: 3   EPLLAITDLAKNFSGVWALNKVQLTVLPGEIHALLGENGAGKSTLLKALAGAQPQTSGDI 62

Query: 64  RLEGQPVQFR-SPIEARKAGIETVYQNLALSPALSIADNMFLGREIRKPGIQGSLFRALD 122
           R  G+ +  + SP+E +  GI T+YQ   L P +++A+N+FLGRE+++      LF  +D
Sbjct: 63  RFNGELLSPQDSPVERQNRGIVTIYQEFNLLPNMTVAENLFLGRELQR----NRLF--VD 116

Query: 123 RPAMEKFAREKLSELGLMTIQNINQAVETLSGGQRQGVAVARAAAFGSKVVILDEPTAAL 182
             A+ + AR  L  L L  I    Q V  LS  Q+Q V +ARA    ++++++DEP+AAL
Sbjct: 117 AQAVNQEARTVLEYLQL-NISPTTQ-VARLSVAQQQMVEIARALTLNARLIVMDEPSAAL 174

Query: 183 GVKESRRVLELILDVRSRGLPIVLISHNMPHVFEVADRIHIHRLGKRLCVINPKDYSMSD 242
              E   +  ++ ++++RG+ ++ ++H +  VF++ DR  + + G+     N  D  ++ 
Sbjct: 175 SDSEVASLHRVVRELKARGVSVIYVTHRLHEVFQLCDRFTVLQDGRYTGSGNVADIDVAG 234

Query: 243 AVAFMTG-----AKEAPQET 257
            +  M G      +  P ET
Sbjct: 235 IIRMMVGRDVVFTRRPPSET 254



 Score = 96.3 bits (238), Expect = 1e-24
 Identities = 67/207 (32%), Positives = 104/207 (50%), Gaps = 14/207 (6%)

Query: 21  ALDNADFDLYPGEILAVIGDNGAGKSSLIKAISGAVTPDEGEIRLEGQPVQFRSPIEARK 80
           ALDN  F ++ GEIL + G  GAG++ + + + GA     GE  L+GQP     P+ A +
Sbjct: 281 ALDNIGFQVHTGEILGIAGLVGAGRTEMARCLFGADPFTSGEFWLDGQPYHPVDPLHALE 340

Query: 81  AGIETVYQNLALSPA---LSIADNMFLGREIRKPGIQGSLFR---ALDRPAMEKFAREKL 134
            GI  V ++     A   LSI +N+ L           SL R    +D    +       
Sbjct: 341 QGIALVPEDRKKEGAVLGLSIRNNLSLSS-------LSSLLRWRYFVDTRREDDLIESYR 393

Query: 135 SELGLMTIQNINQAVETLSGGQRQGVAVARAAAFGSKVVILDEPTAALGVKESRRVLELI 194
             L +  + +  Q V  LSGG +Q V +AR  A   +V+I+DEPT  + V     V +++
Sbjct: 394 QALRIKMVDS-EQEVRKLSGGNQQKVILARCMALNPRVLIVDEPTRGIDVGTKSEVHQVL 452

Query: 195 LDVRSRGLPIVLISHNMPHVFEVADRI 221
            D+  RG+ +++IS ++P V  V+DRI
Sbjct: 453 FDMAKRGVAVIVISSDLPEVMAVSDRI 479