Pairwise Alignments

Query, 260 a.a., ABC transporter, nucleotide binding/ATPase protein (sugar) from Agrobacterium fabrum C58

Subject, 267 a.a., ABC transporter permease from Agrobacterium fabrum C58

 Score =  194 bits (493), Expect = 2e-54
 Identities = 105/249 (42%), Positives = 151/249 (60%), Gaps = 8/249 (3%)

Query: 3   KEPILTARNLVKRYGRVTALDNADFDLYPGEILAVIGDNGAGKSSLIKAISGAVTPDEGE 62
           +E  ++ RN+ K +G   AL   D D++PGE L ++GDN AGKS+L K ISG   PD+G 
Sbjct: 25  REARISLRNIRKTFGSHQALRGVDLDIFPGECLGLVGDNAAGKSTLTKVISGTYIPDDGT 84

Query: 63  IRLEGQPVQFRSPIEARKAGIETVYQNLALSPALSIADNMFLGREIRKPGIQGSLFRALD 122
           I +EG+ ++F  P +AR   IE V+Q+L+L   + +  N+FLGREI K          LD
Sbjct: 85  ITMEGEAIRFSGPADARNRNIEMVFQDLSLCDHIDVVGNLFLGREITKGPF-------LD 137

Query: 123 RPAMEKFAREKLSELGLMTIQNINQAVETLSGGQRQGVAVARAAAFGSKVVILDEPTAAL 182
           RP M   AR+ L  L +  I  +   VE LSGGQRQ +A+ARAA+F  KV+I+DEPT+AL
Sbjct: 138 RPTMLSEARKMLDALEI-RIPRLTSKVEKLSGGQRQAIAIARAASFNPKVLIMDEPTSAL 196

Query: 183 GVKESRRVLELILDVRSRGLPIVLISHNMPHVFEVADRIHIHRLGKRLCVINPKDYSMSD 242
            V E   VL LI  V+++G+ ++LI+H +  +F V DRI +   G ++      D S+ D
Sbjct: 197 AVAEVEAVLSLINRVKAKGVSVILITHRLQDLFRVCDRIAVMYEGTKVAERQINDTSLED 256

Query: 243 AVAFMTGAK 251
            V  + G +
Sbjct: 257 LVRLIVGGQ 265