Pairwise Alignments

Query, 260 a.a., ABC transporter, nucleotide binding/ATPase protein (sugar) from Agrobacterium fabrum C58

Subject, 492 a.a., ABC transporter, nucleotide binding/ATPase protein (ribose) from Agrobacterium fabrum C58

 Score =  165 bits (418), Expect = 1e-45
 Identities = 93/228 (40%), Positives = 144/228 (63%), Gaps = 9/228 (3%)

Query: 3   KEPILTARNLVKRYGRVTALDNADFDLYPGEILAVIGDNGAGKSSLIKAISGAVTPDEGE 62
           +EP+L+ R + KRYG +  L + D ++YPGE++A++G+NGAGKS+L   I+G+  P EG+
Sbjct: 2   REPVLSLRGISKRYGPLEVLKSVDLEVYPGEVVALLGENGAGKSTLSGIIAGSREPSEGK 61

Query: 63  IRLEGQPVQFRSPIEARKAGIETVYQNLALSPALSIADNMFLGREIRKPGIQGSLFRALD 122
           +   GQP Q  SP EA   GI  ++Q L L P LSIA+N+F+GR   K GI       +D
Sbjct: 62  MTWLGQPYQPASPREAIDKGIVLIHQELKLLPELSIAENVFIGRWPMKNGI-------VD 114

Query: 123 RPAMEKFAREKLSELGLMTIQNINQAVETLSGGQRQGVAVARAAAFGSKVVILDEPTAAL 182
           R  M + A+++L+ L L       + V  LS   +Q + +A+A A  +K++ILDEPTAAL
Sbjct: 115 RAEMVRRAQQQLARLNLHI--PATRKVAGLSTANQQLIEIAKALALDAKLLILDEPTAAL 172

Query: 183 GVKESRRVLELILDVRSRGLPIVLISHNMPHVFEVADRIHIHRLGKRL 230
           G  E++ + E +  +R+ G+ I+ ISH M  + ++ DRI + R G+R+
Sbjct: 173 GGAETQALFEQVRKLRAEGVGIIYISHRMEEIRQITDRIVVLRDGERV 220



 Score =  102 bits (253), Expect = 2e-26
 Identities = 67/223 (30%), Positives = 114/223 (51%), Gaps = 15/223 (6%)

Query: 17  GRVTALDNADFDLYPGEILAVIGDNGAGKSSLIKAISGAVTPDEGEIRLEGQPVQFRSPI 76
           G   A  +  F +  GEIL + G  GAG++ L++AISGA     GE+RL+G+ +  +SP 
Sbjct: 265 GATNAFRDISFGVRAGEILGIAGLIGAGRTELVRAISGADPTSAGEVRLDGEVLSLKSPA 324

Query: 77  EARKAGIETVYQNLALSPAL---SIADNMFLGR--EIRKPGIQGSLFRALDRPAMEKFAR 131
           +A   GI  V ++  L   +    I +N+       +    I  ++ RA  R A+ KF  
Sbjct: 325 DAIAKGIVMVPEDRKLQGLVVEHEIGENLIYANLDRVGTGWITPAIKRAFTRDAIAKFGV 384

Query: 132 EKLSELGLMTIQNINQAVETLSGGQRQGVAVARAAAFGSKVVILDEPTAALGVKESRRVL 191
           +  SE          Q    LSGG +Q V +A+  A   +VV+LDEPT  + V     + 
Sbjct: 385 KGRSE----------QPASDLSGGNQQKVVIAKWLARNPRVVVLDEPTRGIDVGARAGIY 434

Query: 192 ELILDVRSRGLPIVLISHNMPHVFEVADRIHIHRLGKRLCVIN 234
           ++I+ +   G+ ++++S ++  V  V++RI +   GK+  ++N
Sbjct: 435 DIIVGLAKDGVAVIVVSSDLEEVLGVSNRILVLAQGKQAGILN 477