Pairwise Alignments

Query, 360 a.a., ABC transporter, membrane spanning protein (sugar) from Agrobacterium fabrum C58

Subject, 325 a.a., ribose ABC transporter permease from Agrobacterium fabrum C58

 Score =  191 bits (485), Expect = 2e-53
 Identities = 112/306 (36%), Positives = 175/306 (57%), Gaps = 9/306 (2%)

Query: 46  SPAAVPLIVLVLSLAIFGMTLGGKFFSAFSLTLILQQVAIVGIVGAAQSLVILTAGIDLS 105
           SP A+PL  L++   + G+     FFS  ++  +L+QV++VGI+    + VILT GIDLS
Sbjct: 24  SPLALPLAGLIVVSILMGLA-SDNFFSVNNIMNVLRQVSVVGILAVGMTFVILTGGIDLS 82

Query: 106 VGAIMVLSSVVMGQFTFRYGLPAELSIICGLAVGAFCGFINGVLVSRMRLPPFIVTLGMW 165
           VGA+M L   +        GL   +++  GL +G   G  NG LV+  R+P  IVTL   
Sbjct: 83  VGAVMALVGTLSAGLMVNTGLSPAIALPAGLFIGLGIGIFNGALVAWGRMPAIIVTLATM 142

Query: 166 QIVLATNFLYSANETIRAQDIVQQAPILQFFGNNIRIGNAVFTYGVLAMVLLVALLWYVL 225
            +      +YS    +           + +FG   R+G  +    V+ MV++ A+ W +L
Sbjct: 143 GMARGLGLIYSGGYPVSGIP-----SWISWFGVG-RVG--IVPVPVIIMVVIYAVAWVLL 194

Query: 226 NRTAWGRHLYAVGDDPDAAELAGVNVKRMLTTVYTLSGLICAFAGWALIGRIGSVSPTAG 285
            RTA+GRH+YA+G +  AA L+GV  +R+   VY +SG+  AFA   L GR+ S  P AG
Sbjct: 195 QRTAFGRHVYALGGNELAARLSGVKTRRVKLAVYGISGVTAAFAALILTGRLMSGQPNAG 254

Query: 286 QFANIESITAVVIGGISLFGGRGSIMGMIFGALIVGVFSLGLRLIGTDPQWTYLLIGVLI 345
               +++I AVV+GG ++ GGRG I+G + GA+++G+ + GL L+G +P    ++ G +I
Sbjct: 255 VGFELDAIAAVVLGGTAIAGGRGLILGTLIGAVLLGILNNGLNLMGINPYLQDVIKGGII 314

Query: 346 ILAVAI 351
           +LA+ I
Sbjct: 315 LLAIYI 320