Pairwise Alignments

Query, 360 a.a., ABC transporter, membrane spanning protein (sugar) from Agrobacterium fabrum C58

Subject, 340 a.a., ABC transporter, membrane spanning protein (ribose) from Agrobacterium fabrum C58

 Score =  186 bits (471), Expect = 1e-51
 Identities = 118/340 (34%), Positives = 176/340 (51%), Gaps = 29/340 (8%)

Query: 27  AFDTHNKSLLEKFQHFLHSSPAAVPLIVLVLSLAIFGMTLGGKFFSAFSLTLILQQVAIV 86
           A     K +++KF        A   L  LV   A+F  T    FF+  +   I  QV  +
Sbjct: 12  AVSDRQKDIIQKFA-------ALGSLFALV---AVFSAT-SNAFFTVNNGMTIALQVTSI 60

Query: 87  GIVGAAQSLVILTAGIDLSVGAIMVLSSVVMGQFTFRYGLPAELSIICGLAVGAFCGFIN 146
            ++G   + VI+T GIDLSVG+++ L+ VV        G+P  + ++ G+  G+ CG IN
Sbjct: 61  ALLGIGATCVIITGGIDLSVGSVLALAGVVAALAVKELGMPVPIGMLLGILTGSLCGLIN 120

Query: 147 GVLVSRMRLPPFIVTLGMWQIVLATNFLYSANETIRAQDIVQQAPILQFFGNN-----IR 201
           G+LV+R +LPPFI TLGM  I         A +   A+ +          GN      + 
Sbjct: 121 GLLVTRFKLPPFIATLGMMLIARGV-----ALQITGARAVSGLGESFGELGNGALFRIVT 175

Query: 202 IG-----NAVFT---YGVLAMVLLVALLWYVLNRTAWGRHLYAVGDDPDAAELAGVNVKR 253
           IG     N VF    Y V+ MV++   + ++LNR+  GRH+YAVG + DAA L+GVNV R
Sbjct: 176 IGDDGFPNVVFPGIPYPVILMVVIALAVSFMLNRSILGRHIYAVGSNADAARLSGVNVAR 235

Query: 254 MLTTVYTLSGLICAFAGWALIGRIGSVSPTAGQFANIESITAVVIGGISLFGGRGSIMGM 313
           +    Y LSG +    G  L+ R+ +  P  G    +++I + VIGG SL GG G+I G 
Sbjct: 236 VTNFTYILSGTLAGLTGCVLMSRLVTAQPNEGVMYELDAIASAVIGGTSLIGGVGTISGT 295

Query: 314 IFGALIVGVFSLGLRLIGTDPQWTYLLIGVLIILAVAIDQ 353
             GA ++G+   GL + G       ++IG++I++ V IDQ
Sbjct: 296 AIGAFVIGILRNGLNMNGVSAFTQQIIIGLVILVTVWIDQ 335