Pairwise Alignments

Query, 340 a.a., ABC transporter, substrate binding protein (sugar) from Agrobacterium fabrum C58

Subject, 313 a.a., transcriptional regulator from Escherichia coli ECRC99

 Score =  112 bits (280), Expect = 1e-29
 Identities = 101/299 (33%), Positives = 147/299 (49%), Gaps = 34/299 (11%)

Query: 1   MKTTVSALL-GALALGVSFASAASAADTSVCLITKTD-TNPFFVKMKEGATAKAKEL-GV 57
           +K  V+AL  GAL     FA A       V   T  D  NPFFV++ +GA  +A++L G 
Sbjct: 3   LKPLVTALCAGALLAAAPFAQAKELKSIGV---TVGDLANPFFVQITKGAELEARKLAGD 59

Query: 58  TLKSYAGKIDGDSESQVAAIETCIADGAKGILITASDTKGIVPAVQKARDAGLLVIALDT 117
            +K        D   QV+ I+  IA     I++ A+D+KGI PAV++A+DAG++V+A+D 
Sbjct: 60  NVKVTLVSSGYDLGQQVSQIDNFIAANVDMIILNAADSKGIGPAVKRAKDAGIVVVAVDV 119

Query: 118 PLEPVDAADSTFATDNLLAGELIGKWAAGTLGDKAKDAKIAFLNLTPSQPTVDVLRNQGF 177
             E    AD+T  +DN  AGE+  K+    L  K     +  +N     P V  ++N+  
Sbjct: 120 AAE---GADATITSDNTQAGEMACKYITDRLKGK---GNVVIIN----GPPVSAVQNR-- 167

Query: 178 MKGFGIDVK---DINKIGDEDDKRIVGHDVTNGNEEGGRSAMENLLQKDPTINVVHTINE 234
           ++G   + K   DI  + D  + +        G+ EGG   M  LL  +P I+ V  IN+
Sbjct: 168 VEGCQTEFKRHPDIKVLSDNQNAK--------GSREGGLEVMTGLLAANPKIDGVFAIND 219

Query: 235 PAAAGAYEALKAVGREKDVLIVSVDGGCPGVKNVAE---GVIGATSQQYPLLMAALGVE 290
           P A GA  A K   R  +  IV VDG  P  +   +    +  AT  Q P +MAA  VE
Sbjct: 220 PTAIGADLAAKQAQR-NEFFIVGVDGS-PDAEEALKRENSLFVATPAQDPQVMAAKAVE 276