Pairwise Alignments

Query, 340 a.a., ABC transporter, substrate binding protein (sugar) from Agrobacterium fabrum C58

Subject, 311 a.a., D-allose transporter substrate-binding protein from Escherichia coli ECOR27

 Score = 85.5 bits (210), Expect = 2e-21
 Identities = 74/287 (25%), Positives = 130/287 (45%), Gaps = 21/287 (7%)

Query: 20  SAASAADTSVCLITKTDTNPFFVKMKEGATAKAKELGVTLKSYAGKIDGDSESQVAAIET 79
           SA +AA+ +V L  KT +NPF+V MK+G   +AK LGV++  +A   +GD +SQ+   E 
Sbjct: 20  SAFAAAEYAVVL--KTLSNPFWVDMKKGIEDEAKTLGVSVDIFASPSEGDFQSQLQLFED 77

Query: 80  CIADGAKGILITASDTKGIVPAVQKARDAGLLVIALDTPLEPVDA------ADSTFATDN 133
                 KGI      +  +V  V +A   G+ ++ LD  ++  +        +    TDN
Sbjct: 78  LSNKNYKGIAFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMDNLKKAGGNVEGFVTTDN 137

Query: 134 LLAGELIGKWAAGTLGDKAKDAKIAFLNLTPSQPTVDVLRNQGFMKGFGIDVKDINKIGD 193
           +  G     +    LG  A+  ++A +       + +  RN G  + F    K  ++I  
Sbjct: 138 VAVGAKGASFIIDKLG--AEGGEVAIIEGKAGNASGEARRN-GATEAF----KKASQI-- 188

Query: 194 EDDKRIVGHDVTNGNEEGGRSAMENLLQKDPTINVVHTINEPAAAGAYEALKAVGREKDV 253
               ++V     + +         N+LQ++P I  ++  N+  A G  +A+   G+   +
Sbjct: 189 ----KLVASQPADWDRIKALDVATNVLQRNPNIKAIYCANDTMAMGVAQAVANAGKTGKI 244

Query: 254 LIVSVDGGCPGVKNVAEGVIGATSQQYPLLMAALGVEAVKKFADTGE 300
           L+V  DG     K V  G + AT  Q P  + A G++ +     +G+
Sbjct: 245 LVVGTDGIPEARKMVEAGQMTATVAQNPADIGATGLKLMVDAEKSGK 291