Pairwise Alignments

Query, 340 a.a., ABC transporter, substrate binding protein (sugar) from Agrobacterium fabrum C58

Subject, 336 a.a., sugar ABC transporter substrate-binding protein from Agrobacterium fabrum C58

 Score = 84.3 bits (207), Expect = 4e-21
 Identities = 78/278 (28%), Positives = 121/278 (43%), Gaps = 21/278 (7%)

Query: 3   TTVSALLGALALGVSFASAASAADTSVCLITKTDTNPFFVKMKEGATAKAKELGVTLKSY 62
           T+V AL  AL++     S A AAD  + L+ K+  N FF    +GA   AK+LG     Y
Sbjct: 9   TSVLALSAALSVA-GLGSIAEAADVKIALVVKSLGNGFFEAANKGAQEAAKDLGGVEIIY 67

Query: 63  AGKIDGDSESQVAAIETCIADGAKGILITASDTKGIVPAVQKARDAGLLVIALDTPLEPV 122
            G     +E Q+  I + IA G   I I+A+D   +VPA++KA   G+ VI+ D+ + P 
Sbjct: 68  TGPTSTTAEGQIEVINSLIAQGVDAIAISANDPDAVVPALKKAAQRGIKVISWDSGVAPE 127

Query: 123 DAADSTFATDNLLAGELIGKWAAGTLGDKAKDAKIAFLNLTPSQPTVDVLRNQGFMKGFG 182
                   + N L G++  + AA  L     D  I     T +   V +    G MK   
Sbjct: 128 GRILQLNPSSNALIGKMCLQLAAAHLEGGKGDFAILSATTTSTNQNVWI----GEMKKQL 183

Query: 183 IDVKDINKIGDEDDKRIVGHDVTNGNEEGGRSAMENLLQKDPTINVVHTINEPAAAGAYE 242
            D   +N +       + G D+    ++  R A + LL   P + V+          A +
Sbjct: 184 KDFPGLNLV-----TTVYGDDLA---DKSYREA-QGLLSSQPNVKVIVAPTTVGVLAASQ 234

Query: 243 ALKAVGREKDVLIVSVDGGCPGVKNVAEGVI--GATSQ 278
           A+K  G+   V +  +     G+ +   G I  GAT +
Sbjct: 235 AVKDAGKIGQVFVTGL-----GLPSEMAGAIKSGATKE 267