Pairwise Alignments

Query, 602 a.a., ATP-dependent DNA helicase from Agrobacterium fabrum C58

Subject, 532 a.a., ATP-dependent RNA helicase RhlE from Xanthobacter sp. DMC5

 Score = 78.6 bits (192), Expect = 6e-19
 Identities = 86/332 (25%), Positives = 132/332 (39%), Gaps = 33/332 (9%)

Query: 14  GYDAFRGRQGEIIQHVVAGNNAFVLMPTGGGKSLCYQIPAL---------AREGMGLVVS 64
           GY      Q + I HV+A  +   L  TG GK+  + +P L         AR    L++ 
Sbjct: 20  GYTTPTPIQAQAIPHVLARRDVLGLAQTGTGKTAAFTLPMLTLLEQGRARARMPRTLILE 79

Query: 65  PLIALMVDQVAALRQAG----VRAEALNSDLSPEERRTLWRDVRAGNVDILYAAPETLLK 120
           P   L         + G    +    L   +S  ++ T  + VR   VD+L A P  LL 
Sbjct: 80  PTRELAAQVEENFTRYGKYSKLNVALLIGGVSFGDQDT--KLVRG--VDVLIATPGRLLD 135

Query: 121 PDVLDALQSIDLSLIAVDEAHCLSQWGH--------DFRPPYRQLDMLIARFPNTPRMAL 172
                 L    + ++ +DEA  +   G            P  RQ     A  P   +  +
Sbjct: 136 HVERGRLLLSGIEVLVIDEADRMLDMGFIPDIERICKLVPFTRQTLFFSATMPPEIQRLV 195

Query: 173 TATADEPTRAEILGHLAIDEADAFIAGFDRPNIRYAIMEKDNPRTQLKRFLNGREN-ESG 231
           +     P R E+          A  A      +  +  E    R  L+  +   EN ++G
Sbjct: 196 SQFLSSPVRVEV-------SKPASTATTVTQELVASGREDYEKREVLRELIRSCENLQNG 248

Query: 232 IVYCLSKRKVEETAAWLREEGRDALPYHAGMDKAAREENQTRFQHGEAVIIVATVAFGMG 291
           I++C  KR V      L++ G +A+  H  MD+ AR +    F++GEA ++VA+     G
Sbjct: 249 IIFCNRKRDVAVLHRSLQKHGFNAVALHGDMDQHARIKALDEFRNGEATLLVASDVAARG 308

Query: 292 IDKPDVRFVVHIDLPGSIEAYYQETGRAGRDG 323
           +D P V  V + D+P   E Y    GR GR G
Sbjct: 309 LDIPAVSHVFNYDVPHHSEDYVHRIGRTGRAG 340