Pairwise Alignments

Query, 144 a.a., hypothetical protein from Agrobacterium fabrum C58

Subject, 140 a.a., alternative stalled-ribosome rescue factor B; peptidyl-tRNA hydrolase, ribosome-attached from Escherichia coli BL21

 Score = 91.3 bits (225), Expect = 5e-24
 Identities = 55/135 (40%), Positives = 78/135 (57%), Gaps = 2/135 (1%)

Query: 6   LYISNRITIAGWELTEQFVLAGGPGGQNVNKVSTAVQLFFDIANSPSLSDRVKANAVRLG 65
           + IS  + I   EL    + A G GGQ+VNK STA+ L FDI  S SL +  K   +   
Sbjct: 2   IVISRHVAIPDGELEITAIRAQGAGGQHVNKTSTAIHLRFDIRAS-SLPEYYKERLLAAS 60

Query: 66  GRRVSKEGVLMIEASRFRSQERNREDARERLKELILEAAAPPPPVRKATKPTKGSVERRL 125
              +S +GV++I+A  +RSQE NRE A  RL  +I +        R+ T+PT+ S ERRL
Sbjct: 61  HHLISSDGVIVIKAQEYRSQELNREAALARLVAVIKDLTT-EQKARRPTRPTRASKERRL 119

Query: 126 KAKSGRSDIKKMRGK 140
            +K+ +S +K +RGK
Sbjct: 120 ASKAQKSSVKALRGK 134