Pairwise Alignments

Query, 189 a.a., hypothetical protein from Agrobacterium fabrum C58

Subject, 183 a.a., endonuclease SmrB from Escherichia coli ECRC101

 Score = 42.4 bits (98), Expect = 5e-09
 Identities = 49/193 (25%), Positives = 78/193 (40%), Gaps = 37/193 (19%)

Query: 1   MKGSRKLGKEERILWGRVAKTTRPISGRLEDLLAFDDVEEHPLEPSVPQTGKSAFPRMIV 60
           MK    L +E++ L+ ++   TR I          D +   P    V +       R+I 
Sbjct: 1   MKKKTTLSEEDQALFRQLMAGTRKIKQ--------DTIVHRPQRKKVSEV---PVKRLIQ 49

Query: 61  ETAEALPASPDKKPKTHQPM---EKPVK-----------RKLTRGRLPLEGRIDLHGMFQ 106
           E  +A     D+     QP+   + PVK           +KL RG    E  +DLHG+ Q
Sbjct: 50  EQVDASHYFSDE----FQPLLNADGPVKYVRPGVDHFEAKKLRRGDYSPELFLDLHGLTQ 105

Query: 107 SEAHAVLLDFLLRAHERGLRHVLVITGKGRSIGSDGALKRAVPMWFAKPEYRYLISSYED 166
            +A   L   +       +    V+ G G+ I     LK+  P+W A+  +   + ++  
Sbjct: 106 LQAKQELGALIAACRREHVFCACVMHGHGKHI-----LKQQTPLWLAQHPH---VMAFHQ 157

Query: 167 ASANHGGDGALYV 179
           A   +GGD AL V
Sbjct: 158 APKEYGGDAALLV 170