Pairwise Alignments

Query, 570 a.a., Single-stranded-DNA-specific exonuclease RecJ from Acinetobacter radioresistens SK82

Subject, 623 a.a., single-stranded-DNA-specific exonuclease RecJ from Rhodanobacter sp. FW510-T8

 Score =  374 bits (959), Expect = e-108
 Identities = 235/609 (38%), Positives = 340/609 (55%), Gaps = 72/609 (11%)

Query: 21  VSPFLAHILARRGVASEQELELRLKYLLSP-CLKGLEQAVEIINQAIDQQKKIVIVGDYD 79
           V P L  I A RGV    + E RL  +LSP  L G+  AV+++ +AI     I+I GDYD
Sbjct: 22  VHPVLQQIYAARGVLEPGQAEHRLARMLSPQLLGGMAPAVDLLAEAIRDDWAILIAGDYD 81

Query: 80  ADGATSTALMILALRDMGAD-VAYLVPDRFKYGYGLTPAIADLAFTRFTPDLLITVDNGI 138
            DGAT TA+ +  LR +GA  V+Y +P+RF +GYGL+PA   +A  + TP L++TVDNG+
Sbjct: 82  CDGATGTAVAVRGLRLLGARRVSYAIPNRFAHGYGLSPAF--VASLQPTPQLIVTVDNGV 139

Query: 139 SSHEGVKQAQDHGMQVIITDHHLTTKETPAAEAVVNPN----QLGCNFPS---------- 184
           +S  GV  A+  G++VI+TDHHL  ++ PA +A+VNPN    + G   P           
Sbjct: 140 ASIAGVAAAKARGIRVIVTDHHLPGEQLPACDALVNPNVSLEKCGQGSPPLDSRVQDARM 199

Query: 185 KALAGVGVAFYVLANLCSFRKRA-------------------DQ-----SVSNITQYLDL 220
           K LAGVGV FY+L  L +  + +                   DQ     +V +++  LDL
Sbjct: 200 KNLAGVGVMFYLLLALRARMRESGWFVQAGEHTKGRALVDTGDQDDRKSAVPDLSGLLDL 259

Query: 221 VALGTYADVASLDYNNRILVDAGLKRIQQQQCRPGILALLDIAGREPAALKAQDLGFVLG 280
           VALGT AD+  LD+NNR+LV+AGL+R++  +   GI AL++   R  A L + DL F +G
Sbjct: 260 VALGTVADLVPLDFNNRVLVEAGLQRMRSGRACAGIAALVEAGKRSLATLCSTDLAFAVG 319

Query: 281 PRINAAGRMETMEIGIECLLAPDLENAYPLARQLNQLNIERRQIEAQMKQEALRYLEQLQ 340
           PR+NAAGR+E M +G+ECLL  D+  A   A QL+ +N ERR ++A M  EA    E L 
Sbjct: 320 PRLNAAGRLEDMRLGVECLLTDDVAQARRHAEQLDAINRERRDLQASMVAEA----EVLA 375

Query: 341 LSKENIPP-ALIMFEEHWHQGVIGIVAGRLKEQFHRPSIVFA------------------ 381
               +     ++++E  WH GV+G+VA +LKE+ HRP I FA                  
Sbjct: 376 AGLAHTDAVGVVLYEPSWHAGVVGLVAAKLKERLHRPVIAFAPASLEECGDGSPLLDLRA 435

Query: 382 --ADEDGIHIKGSARSVEGIHIRDCIEQIAEQYPHLVRYFGGHAAAAGLTIRKEHFLEFK 439
             A     H++GSARS+ G HIRD +  I  + P L+  FGGHA AAGL+++   +  F 
Sbjct: 436 QDARTGHAHLRGSARSIPGFHIRDALAAIDARQPGLIERFGGHAMAAGLSLKTGDYPRFA 495

Query: 440 QVFIQLIAGMDE-TLLSATLWTDGELPVEALVLDTVDLIEKLGPWGQKFPSPVFEGIFKV 498
             F  +   + E   L A L+TDGELP  A  L     +   GPWGQ FP P+F+ +F+ 
Sbjct: 496 AAFDAIARELIEPERLQAVLYTDGELPPGAATLALARQLRAAGPWGQAFPEPLFDNLFEC 555

Query: 499 VDFRWLKETHLKLRLA-LNNGQVVDAIAFNAKDRFEYDPENDQVDLVYELERNEFNGNTG 557
             ++ + E HL+L+L    +G + DA+ FNA   +   P   ++   YEL  N++ G   
Sbjct: 556 AGWKVMGENHLRLQLRDPRDGALHDAVMFNA---YHGQPPPPRLRAAYELTINDWQGRES 612

Query: 558 LQLRIIHLK 566
            +L + +++
Sbjct: 613 PRLLLRYIE 621