Pairwise Alignments

Query, 272 a.a., Formamidopyrimidine-DNA glycosylase from Acinetobacter radioresistens SK82

Subject, 269 a.a., bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase from Escherichia coli ECRC62

 Score =  232 bits (592), Expect = 6e-66
 Identities = 123/268 (45%), Positives = 169/268 (63%), Gaps = 2/268 (0%)

Query: 1   MPELPEVETTKKSLEP-LLQQKVMSVEVREPRLRWAIPQDIQKLQGQKLIRLNRRSKYIL 59
           MPELPEVET+++ +EP L+   ++   VR  RLRW + ++I +L  Q ++ + RR+KY+L
Sbjct: 1   MPELPEVETSRRGIEPHLVGATILHAVVRNGRLRWPVSEEIYRLSDQPVLSVQRRAKYLL 60

Query: 60  AQFEHDTMLWHLGMSGSFRLCEPATELRKHDHLIISFENIQ-LRYHDPRRFGCILWLNHE 118
            +     ++ HLGMSGS R+        KHDH+ +   N + LRY DPRRFG  LW    
Sbjct: 61  LELPEGWIIIHLGMSGSLRILPEELPPEKHDHVDLVMSNGKVLRYTDPRRFGAWLWTKEL 120

Query: 119 TQNKLIDPLGPEPLSEAFNTEYLVNKLKNKQVGIKVALMDNHVVVGVGNIYATESLFNTR 178
             + ++  LGPEPLS+ FN EYL  K   K+  IK  LMDN +VVGVGNIYA+ESLF   
Sbjct: 121 EGHNVLTHLGPEPLSDDFNGEYLHQKCAKKKTAIKPWLMDNKLVVGVGNIYASESLFAAG 180

Query: 179 IHPAQPASSLSYEQIDQLVIEIKRILKFAIELGGSTLRDYSNAAGENGYFQQTLLAYGRE 238
           IHP + ASSLS  + + L   IK +L  +IE GG+TL+D+  + G+ GYF Q L  YGR+
Sbjct: 181 IHPDRLASSLSLAECELLARVIKAVLLRSIEQGGTTLKDFLQSDGKPGYFAQELQVYGRK 240

Query: 239 GEMCINCETPLQNIRLGQRASVFCPECQ 266
           GE C  C TP+   +  QRA+ +C +CQ
Sbjct: 241 GEPCRVCGTPIVATKHAQRATFYCRQCQ 268