SEED Subsystem: tRNA processing in Rhodanobacter sp. FW510-T8

Experiments:

Role Gene Name  
5-carboxymethyl uridine and 5-carboxymethyl 2-thiouridine methyltransferase No genes
Ribonuclease BN (EC 3.1.-.-) OKGIIK_10630
Ribonuclease D (EC 3.1.26.3) OKGIIK_08985
Ribonuclease P protein component (EC 3.1.26.5) OKGIIK_15275 rnpA
Ribonuclease PH (EC 2.7.7.56) OKGIIK_12150 rph
Ribonuclease T (EC 3.1.13.-) OKGIIK_06860 rnt
Ribonuclease Z (EC 3.1.26.11) No genes
tRNA delta(2)-isopentenylpyrophosphate transferase (EC 2.5.1.8) No genes
tRNA pseudouridine 13 synthase (EC 4.2.1.-) OKGIIK_08130 truD
tRNA pseudouridine 55 synthase (EC 4.2.1.70) No genes
tRNA pseudouridine synthase A (EC 4.2.1.70) OKGIIK_04535 rsuA
  OKGIIK_04830 truA
tRNA pseudouridine synthase B (EC 4.2.1.70) OKGIIK_05860 truB
tRNA(Ile)-lysidine synthetase No genes
tRNA-i(6)A37 methylthiotransferase OKGIIK_02990 miaB
tRNA-specific adenosine-34 deaminase (EC 3.5.4.-) OKGIIK_07085 tadA
tRNAHis-5'-guanylyltransferase No genes

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