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SEED Subsystem: Phosphate metabolism in
Rhodanobacter sp. FW510-T8
Experiments:
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Role
Gene
Name
1-acyl-sn-glycerol-3-phosphate acyltransferase (
EC 2.3.1.51
)
OKGIIK
_13280
OKGIIK
_15045
OKGIIK
_15820
plsC
Alkaline phosphatase (
EC 3.1.3.1
)
OKGIIK
_05235
OKGIIK
_13495
phoA
Alkaline phosphatase like protein
No genes
Alkaline phosphatase synthesis transcriptional regulatory protein PhoP
No genes
Apolipoprotein N-acyltransferase (EC 2.3.1.-)
No genes
Distant similarity with phosphate transport system regulator
No genes
Exopolyphosphatase (
EC 3.6.1.11
)
OKGIIK
_03775
ppx
FIG000233: metal-dependent hydrolase
No genes
Guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase (
EC 3.6.1.40
)
No genes
Inorganic pyrophospatase PpaX (
EC 3.1.3.18
)
No genes
Inorganic pyrophosphatase (
EC 3.6.1.1
)
OKGIIK
_16980
ppa
Integral membrane protein YggT, involved in response to extracytoplasmic stress (osmotic shock)
OKGIIK
_11140
Low-affinity inorganic phosphate transporter
No genes
Magnesium and cobalt efflux protein CorC
OKGIIK
_02350
tlyC
OKGIIK
_02955
Manganese-dependent inorganic pyrophosphatase (
EC 3.6.1.1
)
No genes
NAD(P) transhydrogenase alpha subunit (
EC 1.6.1.2
)
OKGIIK
_10680
pntA
OKGIIK
_10700
pntA
NAD(P) transhydrogenase subunit beta (
EC 1.6.1.2
)
OKGIIK
_10675
pntB
Na/Pi cotransporter II-related protein
No genes
Phosphatase, Ppx/GppA family
No genes
Phosphate ABC transporter, periplasmic phosphate-binding protein PstS (TC 3.A.1.7.1)
OKGIIK
_00145
OKGIIK
_06855
pstS
Phosphate regulon sensor protein PhoR (SphS) (
EC 2.7.13.3
)
OKGIIK
_03785
phoR
Phosphate regulon transcriptional regulatory protein PhoB (SphR)
OKGIIK
_03790
phoB
Phosphate starvation-inducible ATPase PhoH with RNA binding motif
No genes
Phosphate starvation-inducible protein PhoH, predicted ATPase
OKGIIK
_02965
phoH
Phosphate transport ATP-binding protein PstB (TC 3.A.1.7.1)
OKGIIK
_06840
pstB
Phosphate transport regulator (distant homolog of PhoU)
No genes
Phosphate transport system permease protein PstA (TC 3.A.1.7.1)
OKGIIK
_06845
pstA
Phosphate transport system permease protein PstC (TC 3.A.1.7.1)
OKGIIK
_06850
pstC
Phosphate transport system regulatory protein PhoU
OKGIIK
_06835
phoU
Phosphate-specific outer membrane porin OprP
No genes
Polyphosphate kinase (
EC 2.7.4.1
)
OKGIIK
_03780
ppk1
OKGIIK
_08995
ppk1
Predicted ATPase related to phosphate starvation-inducible protein PhoH
OKGIIK
_03840
ylaK
Probable low-affinity inorganic phosphate transporter
OKGIIK
_02360
pitA
OKGIIK
_14490
Putative periplasmic phosphate-binding protein PstS (Mycoplasma type)
No genes
Pyrophosphate-energized proton pump (
EC 3.6.1.1
)
OKGIIK
_16995
Pyrophosphate-specific outer membrane porin OprO
No genes
Sodium-dependent phosphate transporter
No genes
Soluble pyridine nucleotide transhydrogenase (
EC 1.6.1.1
)
No genes
putative alkaline phosphatase-like protein
No genes
response regulator in two-component regulatory system with PhoQ
OKGIIK
_04905
OKGIIK
_14885
ompR
secreted alkaline phosphatase
No genes
Or select organism:
Acidovorax sp. GW101-3H11
Acinetobacter baumannii LAC-4
Acinetobacter radioresistens SK82
Agrobacterium fabrum C58
Alteromonas macleodii MIT1002
Azospirillum brasilense Sp245
Azospirillum sp. SherDot2
Bacteroides ovatus ATCC 8483
Bacteroides stercoris CC31F
Bacteroides thetaiotaomicron VPI-5482
Bifidobacterium breve UCC2003
Bosea sp. OAE506
Brevundimonas sp. GW460-12-10-14-LB2
Burkholderia phytofirmans PsJN
Castellaniella sp019104865 MT123
Caulobacter crescentus NA1000
Caulobacter crescentus NA1000 Δfur
Cellulophaga baltica 18
Cupriavidus basilensis FW507-4G11
Dechlorosoma suillum PS
Desulfovibrio vulgaris Hildenborough JW710
Desulfovibrio vulgaris Miyazaki F
Dickeya dadantii 3937
Dickeya dianthicola 67-19
Dickeya dianthicola ME23
Dinoroseobacter shibae DFL-12
Dyella japonica UNC79MFTsu3.2
Echinicola vietnamensis KMM 6221, DSM 17526
Enterobacter asburiae PDN3
Enterobacter sp. TBS_079
Erwinia amylovora T8
Erwinia tracheiphila HP pepo 2.2
Erwinia tracheiphila SCR3
Escherichia coli BL21
Escherichia coli BW25113
Escherichia coli ECOR27
Escherichia coli ECOR38
Escherichia coli ECRC100
Escherichia coli ECRC101
Escherichia coli ECRC102
Escherichia coli ECRC62
Escherichia coli ECRC98
Escherichia coli ECRC99
Escherichia coli HS(pFamp)R (ATCC 700891)
Escherichia coli Nissle 1917
Escherichia fergusonii Becca
Fusobacterium nucleatum SB010
Herbaspirillum seropedicae SmR1
Hydrogenophaga sp. GW460-11-11-14-LB1
Kangiella aquimarina DSM 16071
Klebsiella michiganensis M5al
Klebsiella pneumoniae MKP103
Lysobacter sp. OAE881
Magnetospirillum magneticum AMB-1
Marinobacter adhaerens HP15
Methanococcus maripaludis JJ
Methanococcus maripaludis S2
Methylophilus sp. DMC18
Mucilaginibacter yixingensis YX-36 DSM 26809
Mycobacterium tuberculosis H37Rv
Pantoea agglomerans CFBP13505 P0401
Pantoea sp. MT58
Parabacteroides merdae CL09T00C40
Paraburkholderia bryophila 376MFSha3.1
Paraburkholderia graminis OAS925
Paraburkholderia sabiae LMG 24235
Pectobacterium carotovorum WPP14
Pedobacter sp. GW460-11-11-14-LB5
Phaeobacter inhibens DSM 17395
Phocaeicola dorei CL03T12C01
Phocaeicola vulgatus CL09T03C04
Pontibacter actiniarum KMM 6156, DSM 19842
Pseudomonas aeruginosa MRSN321
Pseudomonas aeruginosa PA14
Pseudomonas aeruginosa PUPa3
Pseudomonas fluorescens FW300-N1B4
Pseudomonas fluorescens FW300-N2C3
Pseudomonas fluorescens FW300-N2E2
Pseudomonas fluorescens FW300-N2E3
Pseudomonas fluorescens GW456-L13
Pseudomonas fluorescens SBW25
Pseudomonas fluorescens SBW25-INTG
Pseudomonas lactucae CFBP13502
Pseudomonas orientalis W4I3
Pseudomonas putida KT2440
Pseudomonas segetis P6
Pseudomonas simiae WCS417
Pseudomonas sp. BP01
Pseudomonas sp. DMC3
Pseudomonas sp. RS175
Pseudomonas sp. S08-1
Pseudomonas sp. SVBP6
Pseudomonas stutzeri RCH2
Pseudomonas syringae pv. syringae B728a
Pseudomonas syringae pv. syringae B728a ΔmexB
Rahnella sp. WP5
Ralstonia solanacearum GMI1000
Ralstonia solanacearum IBSBF1503
Ralstonia solanacearum PSI07
Ralstonia solanacearum UW163
Ralstonia sp. UNC404CL21Col
Rhizobium sp. OAE497
Rhodanobacter denitrificans FW104-10B01
Rhodanobacter denitrificans MT42
Rhodanobacter sp. FW510-T8
Rhodanobacter sp000427505 FW510-R12
Rhodopseudomonas palustris CGA009
Rhodospirillum rubrum S1H
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868
Serratia liquefaciens MT49
Shewanella amazonensis SB2B
Shewanella loihica PV-4
Shewanella oneidensis MR-1
Shewanella sp. ANA-3
Sinorhizobium meliloti 1021
Sphingobium sp. HT1-2
Sphingomonas koreensis DSMZ 15582
Synechococcus elongatus PCC 7942
Synechocystis sp000284455 PCC 6803
Variovorax sp. OAS795
Variovorax sp. SCN45
Vibrio cholerae E7946 ATCC 55056
Xanthobacter sp. DMC5
Xanthomonas campestris pv. campestris strain 8004
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