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SEED Subsystem: Flagellum in
Rhodanobacter sp. FW510-T8
Experiments:
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Role
Gene
Name
Flagellar L-ring protein FlgH
OKGIIK
_02680
flgH
Flagellar M-ring protein FliF
OKGIIK
_02745
fliF
Flagellar P-ring protein FlgI
OKGIIK
_02685
flgI
Flagellar assembly protein FliH
OKGIIK
_02755
Flagellar basal-body P-ring formation protein FlgA
OKGIIK
_02635
flgA
Flagellar basal-body rod modification protein FlgD
OKGIIK
_02660
Flagellar basal-body rod protein FlgB
OKGIIK
_02650
flgB
Flagellar basal-body rod protein FlgC
OKGIIK
_02655
flgC
Flagellar basal-body rod protein FlgF
OKGIIK
_02670
flgF
Flagellar basal-body rod protein FlgG
OKGIIK
_02675
flgG
Flagellar biosynthesis protein FlgN
No genes
Flagellar biosynthesis protein FlhA
OKGIIK
_02815
flhA
Flagellar biosynthesis protein FlhB
OKGIIK
_02810
flhB
Flagellar biosynthesis protein FlhF
OKGIIK
_02820
flhF
Flagellar biosynthesis protein FliC
No genes
Flagellar biosynthesis protein FliL
OKGIIK
_02775
Flagellar biosynthesis protein FliO
No genes
Flagellar biosynthesis protein FliP
OKGIIK
_02795
fliP
Flagellar biosynthesis protein FliQ
OKGIIK
_02790
fliO
OKGIIK
_02800
fliQ
Flagellar biosynthesis protein FliR
OKGIIK
_02805
fliR
Flagellar biosynthesis protein FliS
OKGIIK
_02720
fliS
Flagellar biosynthesis protein FliT
No genes
Flagellar biosynthesis protein FliZ
No genes
Flagellar hook protein FlgE
OKGIIK
_02665
flgE
Flagellar hook-associated protein 3
No genes
Flagellar hook-associated protein FlgK
OKGIIK
_02700
flgK
Flagellar hook-associated protein FlgL
OKGIIK
_02705
flgL
Flagellar hook-associated protein FliD
OKGIIK
_02715
Flagellar hook-basal body complex protein FliE
OKGIIK
_02740
fliE
Flagellar hook-length control protein FliK
OKGIIK
_02770
OKGIIK
_04470
OKGIIK
_07735
Flagellar motor rotation protein MotA
OKGIIK
_02850
motC
Flagellar motor rotation protein MotB
OKGIIK
_02855
motD
Flagellar motor switch protein FliG
OKGIIK
_02750
fliG
Flagellar motor switch protein FliM
OKGIIK
_02780
fliM
Flagellar motor switch protein FliN
OKGIIK
_02785
fliN
Flagellar protein FlbB
No genes
Flagellar protein FlbD
No genes
Flagellar protein FlgJ [peptidoglycan hydrolase] (EC 3.2.1.-)
OKGIIK
_02690
flgJ
Flagellar protein FlhE
No genes
Flagellar protein FliJ
OKGIIK
_02765
fliJ
Flagellar regulatory protein FleQ
OKGIIK
_02735
Flagellar sensor histidine kinase FleS
No genes
Flagellar synthesis regulator FleN
OKGIIK
_02825
Flagellar trans-acting factor FliX
No genes
Flagellar transcriptional activator FlhC
No genes
Flagellar transcriptional activator FlhD
No genes
Flagellin protein FlaA
No genes
Flagellin protein FlaB
OKGIIK
_02710
Flagellin protein FlaC
No genes
Flagellin protein FlaD
No genes
Flagellin protein FlaE
No genes
Flagellin protein FlaF
No genes
Flagellin protein FlaG
No genes
Flagellum-specific ATP synthase FliI
OKGIIK
_02760
fliI
Negative regulator of flagellin synthesis
No genes
Negative regulator of flagellin synthesis FlgM
No genes
RNA polymerase sigma factor RpoD
OKGIIK
_13865
rpoD
RNA polymerase sigma factor for flagellar operon
OKGIIK
_02830
fliA
RNA polymerase sigma-54 factor RpoN
OKGIIK
_02265
OKGIIK
_10685
rpoE
OKGIIK
_14380
Or select organism:
Acidovorax sp. GW101-3H11
Acinetobacter baumannii LAC-4
Acinetobacter radioresistens SK82
Agrobacterium fabrum C58
Alteromonas macleodii MIT1002
Azospirillum brasilense Sp245
Azospirillum sp. SherDot2
Bacteroides ovatus ATCC 8483
Bacteroides stercoris CC31F
Bacteroides thetaiotaomicron VPI-5482
Bifidobacterium breve UCC2003
Bosea sp. OAE506
Brevundimonas sp. GW460-12-10-14-LB2
Burkholderia phytofirmans PsJN
Castellaniella sp019104865 MT123
Caulobacter crescentus NA1000
Caulobacter crescentus NA1000 Δfur
Cellulophaga baltica 18
Cupriavidus basilensis FW507-4G11
Dechlorosoma suillum PS
Desulfovibrio vulgaris Hildenborough JW710
Desulfovibrio vulgaris Miyazaki F
Dickeya dadantii 3937
Dickeya dianthicola 67-19
Dickeya dianthicola ME23
Dinoroseobacter shibae DFL-12
Dyella japonica UNC79MFTsu3.2
Echinicola vietnamensis KMM 6221, DSM 17526
Enterobacter asburiae PDN3
Enterobacter sp. TBS_079
Erwinia amylovora T8
Erwinia tracheiphila HP pepo 2.2
Erwinia tracheiphila SCR3
Escherichia coli BL21
Escherichia coli BW25113
Escherichia coli ECOR27
Escherichia coli ECOR38
Escherichia coli ECRC100
Escherichia coli ECRC101
Escherichia coli ECRC102
Escherichia coli ECRC62
Escherichia coli ECRC98
Escherichia coli ECRC99
Escherichia coli HS(pFamp)R (ATCC 700891)
Escherichia coli Nissle 1917
Escherichia fergusonii Becca
Fusobacterium nucleatum SB010
Herbaspirillum seropedicae SmR1
Hydrogenophaga sp. GW460-11-11-14-LB1
Kangiella aquimarina DSM 16071
Klebsiella michiganensis M5al
Klebsiella pneumoniae MKP103
Lysobacter sp. OAE881
Magnetospirillum magneticum AMB-1
Marinobacter adhaerens HP15
Methanococcus maripaludis JJ
Methanococcus maripaludis S2
Methylophilus sp. DMC18
Mucilaginibacter yixingensis YX-36 DSM 26809
Mycobacterium tuberculosis H37Rv
Pantoea agglomerans CFBP13505 P0401
Pantoea sp. MT58
Parabacteroides merdae CL09T00C40
Paraburkholderia bryophila 376MFSha3.1
Paraburkholderia graminis OAS925
Paraburkholderia sabiae LMG 24235
Pectobacterium carotovorum WPP14
Pedobacter sp. GW460-11-11-14-LB5
Phaeobacter inhibens DSM 17395
Phocaeicola dorei CL03T12C01
Phocaeicola vulgatus CL09T03C04
Pontibacter actiniarum KMM 6156, DSM 19842
Pseudomonas aeruginosa PA14
Pseudomonas fluorescens FW300-N1B4
Pseudomonas fluorescens FW300-N2C3
Pseudomonas fluorescens FW300-N2E2
Pseudomonas fluorescens FW300-N2E3
Pseudomonas fluorescens GW456-L13
Pseudomonas fluorescens SBW25
Pseudomonas fluorescens SBW25-INTG
Pseudomonas lactucae CFBP13502
Pseudomonas putida KT2440
Pseudomonas simiae WCS417
Pseudomonas sp. BP01
Pseudomonas sp. DMC3
Pseudomonas sp. RS175
Pseudomonas sp. S08-1
Pseudomonas sp. SVBP6
Pseudomonas stutzeri RCH2
Pseudomonas syringae pv. syringae B728a
Pseudomonas syringae pv. syringae B728a ΔmexB
Rahnella sp. WP5
Ralstonia solanacearum GMI1000
Ralstonia solanacearum IBSBF1503
Ralstonia solanacearum PSI07
Ralstonia solanacearum UW163
Ralstonia sp. UNC404CL21Col
Rhizobium sp. OAE497
Rhodanobacter denitrificans FW104-10B01
Rhodanobacter denitrificans MT42
Rhodanobacter sp. FW510-T8
Rhodanobacter sp000427505 FW510-R12
Rhodopseudomonas palustris CGA009
Rhodospirillum rubrum S1H
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868
Serratia liquefaciens MT49
Shewanella amazonensis SB2B
Shewanella loihica PV-4
Shewanella oneidensis MR-1
Shewanella sp. ANA-3
Sinorhizobium meliloti 1021
Sphingobium sp. HT1-2
Sphingomonas koreensis DSMZ 15582
Synechococcus elongatus PCC 7942
Synechocystis sp000284455 PCC 6803
Variovorax sp. OAS795
Variovorax sp. SCN45
Vibrio cholerae E7946 ATCC 55056
Xanthobacter sp. DMC5
Xanthomonas campestris pv. campestris strain 8004
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