SEED Subsystem: Polyhydroxybutyrate metabolism in Rhodanobacter sp000427505 FW510-R12

Experiments:

Role Gene Name  
3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35) LRK53_RS10545
  LRK53_RS10710
  LRK53_RS11210
  LRK53_RS12020
  LRK53_RS13665
3-hydroxybutyryl-CoA dehydratase (EC 4.2.1.55) No genes
3-hydroxybutyryl-CoA dehydrogenase (EC 1.1.1.157) No genes
3-hydroxybutyryl-CoA epimerase (EC 5.1.2.3) LRK53_RS10545
  LRK53_RS10710
  LRK53_RS12020
  LRK53_RS13665
3-ketoacyl-CoA thiolase (EC 2.3.1.16) No genes
Acetoacetyl-CoA reductase (EC 1.1.1.36) LRK53_RS12685
  LRK53_RS13780
Acetoacetyl-CoA synthetase (EC 6.2.1.16) LRK53_RS00095
Acetyl-CoA acetyltransferase (EC 2.3.1.9) No genes
Butyrate-acetoacetate CoA-transferase subunit A (EC 2.8.3.9) No genes
Butyrate-acetoacetate CoA-transferase subunit B (EC 2.8.3.9) No genes
D(-)-3-hydroxybutyrate oligomer hydrolase (EC 3.1.1.22) LRK53_RS09410
D-beta-hydroxybutyrate dehydrogenase (EC 1.1.1.30) LRK53_RS17935
D-beta-hydroxybutyrate permease LRK53_RS09365
Enoyl-CoA hydratase (EC 4.2.1.17) LRK53_RS10545
  LRK53_RS10645
  LRK53_RS10710
  LRK53_RS11210
  LRK53_RS12020
  LRK53_RS13435
  LRK53_RS13455
  LRK53_RS16440
Intracellular PHB depolymerase (EC 3.1.1.-) LRK53_RS05270
Poly(3-hydroxyalkanoate) depolymerase No genes
Polyhydroxyalkanoate granule-associated protein PhaF No genes
Polyhydroxyalkanoic acid synthase LRK53_RS09100
Putative 3-hydroxyacyl-coa dehydrogenase No genes
Short chain fatty acids transporter LRK53_RS16585
polyhydroxyalkanoate granule-associated protein PhaI No genes
polyhydroxyalkanoate synthesis repressor PhaR No genes

Or select organism:

Or view this subsystem at the SEED (slow)