SEED Subsystem: DNA-replication in Rhodanobacter sp000427505 FW510-R12

Experiments:

Role Gene Name  
ATP-dependent DNA helicase RecG (EC 3.6.1.-) LRK53_RS16735
  LRK53_RS18225
ATP-dependent DNA helicase RecQ LRK53_RS15600
Arrested fork binding No genes
Chromosomal replication initiator protein DnaA LRK53_RS00005
  LRK53_RS15640
Crossover junction endodeoxyribonuclease RuvC (EC 3.1.22.4) LRK53_RS05115
DNA polymerase I (EC 2.7.7.7) LRK53_RS01570
  LRK53_RS06075
DNA polymerase II (EC 2.7.7.7) No genes
DNA polymerase III alpha subunit (EC 2.7.7.7) LRK53_RS06630
  LRK53_RS09915
  LRK53_RS18685
DNA polymerase III beta subunit (EC 2.7.7.7) LRK53_RS00010
  LRK53_RS19130
DNA polymerase III chi subunit (EC 2.7.7.7) LRK53_RS16130
DNA polymerase III delta prime subunit (EC 2.7.7.7) LRK53_RS08920
DNA polymerase III delta subunit (EC 2.7.7.7) LRK53_RS07180
DNA polymerase III epsilon subunit (EC 2.7.7.7) LRK53_RS12090
DNA polymerase III psi subunit (EC 2.7.7.7) No genes
DNA polymerase III subunits gamma and tau (EC 2.7.7.7) LRK53_RS08815
DNA polymerase III theta subunit (EC 2.7.7.7) No genes
DNA primase (EC 2.7.7.-) LRK53_RS01345
DNA primase (EC 2.7.7.-), phage-associated No genes
DNA primase TraC (EC 2.7.7.-) No genes
DNA repair protein RecN LRK53_RS11400
DNA replication protein DnaC No genes
DNA replication terminus site-binding protein No genes
Exodeoxyribonuclease V alpha chain (EC 3.1.11.5) LRK53_RS07840
Exodeoxyribonuclease V beta chain (EC 3.1.11.5) LRK53_RS07845
Exodeoxyribonuclease V gamma chain (EC 3.1.11.5) LRK53_RS07850
Helicase PriA essential for oriC/DnaA-independent DNA replication LRK53_RS03955
Helicase loader DnaI No genes
Holliday junction DNA helicase RuvA LRK53_RS05120
Holliday junction DNA helicase RuvB LRK53_RS05130
Primosomal protein I No genes
Primosomal replication protein N No genes
Primosomal replication protein N prime prime No genes
RecA protein LRK53_RS13640
Recombination protein RecR LRK53_RS08825
Replicative DNA helicase (EC 3.6.1.-) LRK53_RS07415
  LRK53_RS18435
Replicative DNA helicase (EC 3.6.1.-) [SA14-24] No genes
Single-stranded-DNA-specific exonuclease RecJ (EC 3.1.-.-) LRK53_RS09835
  LRK53_RS18145
Transcription-repair coupling factor LRK53_RS08005

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