SEED Subsystem: Oxidative stress in Pseudomonas fluorescens GW456-L13

Experiments:

Role Gene Name  
Alkyl hydroperoxide reductase subunit C-like protein PfGW456L13_1745
  PfGW456L13_917
Catalase (EC 1.11.1.6) PfGW456L13_1281
  PfGW456L13_2583
  PfGW456L13_4215
DNA binding protein starved cells-like peroxide resistance protein No genes
Fe2+/Zn2+ uptake regulation proteins PfGW456L13_2970
Ferric uptake regulation protein No genes
Ferric uptake regulation protein FUR PfGW456L13_5107
Ferroxidase (EC 1.16.3.1) No genes
Fumarate and nitrate reduction regulatory protein PfGW456L13_4071
Heme oxygenase HemO, associated with heme uptake PfGW456L13_1883
Hydrogen peroxide-inducible genes activator PfGW456L13_407
  PfGW456L13_5141
  PfGW456L13_773
Iron-binding ferritin-like antioxidant protein No genes
Iron-responsive regulator Irr No genes
Manganese superoxide dismutase (EC 1.15.1.1) PfGW456L13_5020
Metallothionein No genes
Nitrite-sensitive transcriptional repressor NsrR No genes
NnrS protein involved in response to NO PfGW456L13_3355
Non-specific DNA-binding protein Dps No genes
Organic hydroperoxide resistance protein PfGW456L13_2236
  PfGW456L13_3180
  PfGW456L13_3181
  PfGW456L13_3182
  PfGW456L13_3666
  PfGW456L13_3774
Organic hydroperoxide resistance transcriptional regulator PfGW456L13_2237
  PfGW456L13_2255
  PfGW456L13_3179
Paraquat-inducible protein A PfGW456L13_1544
  PfGW456L13_1545
  PfGW456L13_3224
  PfGW456L13_3225
Paraquat-inducible protein B PfGW456L13_1546
  PfGW456L13_3226
Peroxidase (EC 1.11.1.7) No genes
Peroxidase/catalase HPI (EC 1.11.1.6) No genes
Peroxide stress regulator No genes
Peroxide stress regulator PerR, FUR family No genes
Phytochrome, two-component sensor histidine kinase (EC 2.7.3.-) No genes
Probable peroxiredoxin (EC 1.11.1.15) No genes
Redox-sensitive transcriptional activator SoxR PfGW456L13_2312
Redox-sensitive transcriptional regulator (AT-rich DNA-binding protein) No genes
Regulatory protein SoxS No genes
Rubrerythrin No genes
Superoxide dismutase (EC 1.15.1.1) No genes
Superoxide dismutase [Cu-Zn] precursor (EC 1.15.1.1) No genes
Superoxide dismutase [Fe] (EC 1.15.1.1) PfGW456L13_1779
Superoxide dismutase [Mn/Fe] (EC 1.15.1.1) No genes
Superoxide dismutase [Mn] (EC 1.15.1.1) No genes
Superoxide reductase (EC 1.15.1.2) No genes
Thioredoxin peroxidase 1 (EC 1.6.4.-) No genes
Transcriptional regulator, Crp/Fnr family No genes
Transcriptional regulator, FUR family No genes
Zinc uptake regulation protein ZUR PfGW456L13_598
bacteriophytochrome heme oxygenase BphO No genes
superoxide dismutase [Fe-Zn] (EC 1.15.1.1) No genes
transcriptional regulator, Crp/Fnr family PfGW456L13_481
transcriptional regulator, Fur family No genes

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