SEED Subsystem: Glycine and Serine Utilization in Xanthobacter sp. DMC5

Experiments:

Role Gene Name  
2-amino-3-ketobutyrate coenzyme A ligase (EC 2.3.1.29) No genes
Aminomethyltransferase (glycine cleavage system T protein) (EC 2.1.2.10) GFF1876
Cystathionine beta-synthase (EC 4.2.1.22) No genes
Cystathionine gamma-lyase (EC 4.4.1.1) No genes
D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95) GFF1713
  GFF1818
  GFF2030
  GFF2547
  GFF2767
  GFF2853
  GFF3304
  GFF4076
  GFF4156
  GFF4356
D-serine dehydratase (EC 4.3.1.18) No genes
D-serine dehydratase transcriptional activator No genes
D-serine permease DsdX No genes
D-serine/D-alanine/glycine transporter No genes
Glycerate kinase (EC 2.7.1.31) No genes
Glycine cleavage system H protein GFF1877
Glycine dehydrogenase [decarboxylating] (glycine cleavage system P protein) (EC 1.4.4.2) No genes
Glycine dehydrogenase [decarboxylating] (glycine cleavage system P1 protein) (EC 1.4.4.2) GFF1879
Glycine dehydrogenase [decarboxylating] (glycine cleavage system P2 protein) (EC 1.4.4.2) GFF1880
L-serine dehydratase (EC 4.3.1.17) No genes
L-serine dehydratase 1 (EC 4.3.1.17) No genes
L-serine dehydratase, alpha subunit (EC 4.3.1.17) GFF3430
L-serine dehydratase, beta subunit (EC 4.3.1.17) GFF3430
Monoamine oxidase (1.4.3.4) No genes
Phosphoserine aminotransferase (EC 2.6.1.52) GFF1817
Phosphoserine phosphatase (EC 3.1.3.3) GFF259
Serine hydroxymethyltransferase (EC 2.1.2.1) GFF3431
  GFF575
Serine transporter No genes
Seryl-tRNA synthetase (EC 6.1.1.11) GFF558
Threonine dehydratase, catabolic (EC 4.3.1.19) GFF991

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