SEED Subsystem: DNA-replication in Xanthobacter sp. DMC5

Experiments:

Role Gene Name  
ATP-dependent DNA helicase RecG (EC 3.6.1.-) GFF630
ATP-dependent DNA helicase RecQ GFF753
Arrested fork binding No genes
Chromosomal replication initiator protein DnaA GFF3541
  GFF3878
Crossover junction endodeoxyribonuclease RuvC (EC 3.1.22.4) GFF80
DNA polymerase I (EC 2.7.7.7) GFF1973
DNA polymerase II (EC 2.7.7.7) No genes
DNA polymerase III alpha subunit (EC 2.7.7.7) GFF3043
  GFF583
DNA polymerase III beta subunit (EC 2.7.7.7) GFF3877
DNA polymerase III chi subunit (EC 2.7.7.7) GFF141
DNA polymerase III delta prime subunit (EC 2.7.7.7) GFF691
DNA polymerase III delta subunit (EC 2.7.7.7) GFF131
DNA polymerase III epsilon subunit (EC 2.7.7.7) GFF1991
  GFF3739
DNA polymerase III psi subunit (EC 2.7.7.7) No genes
DNA polymerase III subunits gamma and tau (EC 2.7.7.7) GFF2306
DNA polymerase III theta subunit (EC 2.7.7.7) No genes
DNA primase (EC 2.7.7.-) GFF3243
DNA primase (EC 2.7.7.-), phage-associated GFF3601
DNA primase TraC (EC 2.7.7.-) No genes
DNA repair protein RecN GFF2252
DNA replication protein DnaC No genes
DNA replication terminus site-binding protein No genes
Exodeoxyribonuclease V alpha chain (EC 3.1.11.5) No genes
Exodeoxyribonuclease V beta chain (EC 3.1.11.5) No genes
Exodeoxyribonuclease V gamma chain (EC 3.1.11.5) No genes
Helicase PriA essential for oriC/DnaA-independent DNA replication GFF3942
Helicase loader DnaI No genes
Holliday junction DNA helicase RuvA GFF78
Holliday junction DNA helicase RuvB GFF76
Primosomal protein I No genes
Primosomal replication protein N No genes
Primosomal replication protein N prime prime No genes
RecA protein GFF1169
Recombination protein RecR GFF3747
Replicative DNA helicase (EC 3.6.1.-) GFF1867
Replicative DNA helicase (EC 3.6.1.-) [SA14-24] No genes
Single-stranded-DNA-specific exonuclease RecJ (EC 3.1.-.-) GFF1333
Transcription-repair coupling factor GFF946

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