SEED Subsystem: Bacterial RNA-metabolizing Zn-dependent hydrolases in Xanthobacter sp. DMC5

Experiments:

Role Gene Name  
Cell division protein FtsK GFF2687
  GFF3046
  GFF3749
Cytochrome d ubiquinol oxidase subunit II (EC 1.10.3.-) GFF2020
Ferric uptake regulation protein FUR GFF3729
Hydrolase (HAD superfamily) in cluster with DUF1447 No genes
Inactive homolog of metal-dependent proteases, putative molecular chaperone No genes
Metallo-beta-lactamase family protein, RNA-specific GFF1235
Peptide deformylase (EC 3.5.1.88) GFF2043
  GFF4276
Polyribonucleotide nucleotidyltransferase (EC 2.7.7.8) GFF2302
Protein of unknown function DUF1447 No genes
Ribosomal-protein-S18p-alanine acetyltransferase (EC 2.3.1.-) GFF3730
Transcriptional regulator in cluster with Zn-dependent hydrolase No genes
Trk system potassium uptake protein TrkA GFF844
YgjD/Kae1/Qri7 family, required for threonylcarbamoyladenosine (t(6)A) formation in tRNA No genes
Zn-dependent hydrolase, RNA-metabolising No genes
Zn-dependent hydrolase, RNA-metabolising, CPSF 100 kDa analog No genes
Zn-dependent hydrolase, RNA-metabolising, CPSF 73 kDa analog No genes
cytochrome d ubiquinol oxidase, subunit II-related protein No genes

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