SEED Subsystem: Queuosine-Archaeosine Biosynthesis in Pseudomonas simiae WCS417

Experiments:

Role Gene Name  
COG2047: Uncharacterized protein (ATP-grasp superfamily) No genes
Dihydroneopterin triphosphate pyrophosphohydolase No genes
Dihydroneopterin triphosphate pyrophosphohydolase type 2 No genes
GTP cyclohydrolase I (EC 3.5.4.16) type 1 PS417_19350
  PS417_23495
GTP cyclohydrolase I (EC 3.5.4.16) type 2 PS417_28305
Glutamine amidotransferases class-II (GATase) No genes
Hydrolase (HAD superfamily) in cluster with DUF1447 No genes
Inosine-uridine preferring nucleoside hydrolase (EC 3.2.2.1) PS417_12990
  PS417_18375
NADPH dependent preQ0 reductase No genes
NADPH dependent preQ0 reductase-like No genes
Peptidyl-prolyl cis-trans isomerase (EC 5.2.1.8) PS417_10635
  PS417_27500
Peptidyl-prolyl cis-trans isomerase ppiB (EC 5.2.1.8) No genes
Permease of the drug/metabolite transporter (DMT) superfamily PS417_06865
  PS417_07965
  PS417_11430
  PS417_13665
  PS417_14010
  PS417_14870
  PS417_16825
  PS417_19925
  PS417_20590
  PS417_20680
  PS417_20830
  PS417_21035
  PS417_23410
  PS417_24505
  PS417_02755
Putative preQ0 transporter PS417_22950
Queuosine Biosynthesis QueC ATPase PS417_22400
Queuosine Biosynthesis QueE Radical SAM PS417_22405
Queuosine biosynthesis QueD, PTPS-I No genes
Radical SAM family enzyme, similar to coproporphyrinogen III oxidase, oxygen-independent, clustered with nucleoside-triphosphatase RdgB PS417_26760
S-adenosylmethionine:tRNA ribosyltransferase-isomerase (EC 5.-.-.-) PS417_23250
Substrate-specific component QueT (COG4708) of predicted queuosine-regulated ECF transporter No genes
Substrate-specific component STY3230 of queuosine-regulated ECF transporter No genes
archaeosine tRNA-ribosyltransferase (EC 2.4.2.-) type 1 No genes
archaeosine tRNA-ribosyltransferase (EC 2.4.2.-) type 1 like No genes
archaeosine tRNA-ribosyltransferase (EC 2.4.2.-) type 2 No genes
archaeosine tRNA-ribosyltransferase (EC 2.4.2.-) type 5 No genes
glutamyl-Q-tRNA synthetase PS417_23880
preQ1-regulated inosine-uridine nucleoside hydrolase (EC 3.2.2.1) No genes
tRNA-guanine transglycosylase (EC 2.4.2.29) PS417_23245

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