SEED Subsystem: Polyamine Metabolism in Pseudomonas simiae WCS417

Experiments:

Role Gene Name  
4-aminobutyraldehyde dehydrogenase (EC 1.2.1.19) PS417_05920
  PS417_05945
5'-methylthioadenosine nucleosidase (EC 3.2.2.16) No genes
ABC transporter, periplasmic spermidine putrescine-binding protein PotD (TC 3.A.1.11.1) PS417_05940
  PS417_25755
Agmatinase (EC 3.5.3.11) PS417_20180
Agmatine deiminase (EC 3.5.3.12) PS417_01340
Agmatine/putrescine antiporter, associated with agmatine catabolism No genes
Arginine decarboxylase (EC 4.1.1.19) PS417_04005
Arginine decarboxylase, catabolic (EC 4.1.1.19) No genes
Arginine/agmatine antiporter No genes
Arginine/ornithine antiporter No genes
Arginine/ornithine antiporter ArcD PS417_22320
  PS417_22325
Biosynthetic arginine decarboxylase (EC 4.1.1.19) PS417_03005
Carbamate kinase (EC 2.7.2.2) PS417_22340
Carboxynorspermidine decarboxylase, putative (EC 4.1.1.-) PS417_15465
Carboxynorspermidine dehydrogenase, putative (EC 1.1.1.-) No genes
DNA-binding response regulator, LuxR family, near polyamine transporter PS417_25765
N-carbamoylputrescine amidase (3.5.1.53) No genes
Ornithine decarboxylase (EC 4.1.1.17) PS417_04005
Predicted chaperone lipoprotein YacC, potentially involved in protein secretion No genes
Predicted polyamine sensor NspS, involved in biofilm formation No genes
Probable spermidine/putrescine substrate binding protein in Mollicutes No genes
Probable two-component sensor, near polyamine transporter PS417_25770
Putative GntR-family regulatory protein and aminotransferase near polyamine transporter No genes
Putrescine ABC transporter putrescine-binding protein PotF (TC 3.A.1.11.2) PS417_11790
  PS417_27120
  PS417_27125
  PS417_28155
Putrescine carbamoyltransferase (EC 2.1.3.6) No genes
Putrescine transport ATP-binding protein PotA (TC 3.A.1.11.1) PS417_05935
  PS417_25760
Putrescine transport ATP-binding protein PotG (TC 3.A.1.11.2) PS417_27115
Putrescine transport system permease protein PotH (TC 3.A.1.11.2) PS417_27110
Putrescine transport system permease protein PotI (TC 3.A.1.11.2) PS417_27105
Putrescine-ornithine antiporter No genes
Putrescine/proton symporter, putrescine/ornithine antiporter PotE No genes
S-adenosylmethionine decarboxylase proenzyme (EC 4.1.1.50), eukaryotic No genes
S-adenosylmethionine decarboxylase proenzyme (EC 4.1.1.50), prokaryotic class 1A No genes
S-adenosylmethionine decarboxylase proenzyme (EC 4.1.1.50), prokaryotic class 1B No genes
Spermidine N1-acetyltransferase (EC 2.3.1.57) No genes
Spermidine Putrescine ABC transporter permease component PotB (TC 3.A.1.11.1) PS417_05930
  PS417_25750
Spermidine Putrescine ABC transporter permease component potC (TC_3.A.1.11.1) PS417_05925
  PS417_25745
Spermidine synthase (EC 2.5.1.16) PS417_08530
Transcriptional regulator of catabolic arginine decarboxylase (adiA) No genes
Transcriptional regulator, MerR family, near polyamine transporter No genes
Transcriptional regulator, TetR family, associated with agmatine catabolism No genes
Transcriptional regulator, luxR family, associated with agmatine catabolism No genes

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