SEED Subsystem: Nitrate and nitrite ammonification in Pseudomonas simiae WCS417

Experiments:

Role Gene Name  
Assimilatory nitrate reductase large subunit (EC:1.7.99.4) PS417_14735
Cytochrome c nitrite reductase, small subunit NrfH No genes
Cytochrome c-type heme lyase subunit nrfE, nitrite reductase complex assembly No genes
Cytochrome c-type heme lyase subunit nrfF, nitrite reductase complex assembly No genes
Cytochrome c-type heme lyase subunit nrfG, nitrite reductase complex assembly No genes
Cytochrome c-type protein NapC No genes
Cytochrome c-type protein NrfB precursor No genes
Cytochrome c552 precursor (EC 1.7.2.2) No genes
Ferredoxin--nitrite reductase (EC 1.7.7.1) No genes
Ferredoxin-type protein NapF (periplasmic nitrate reductase) No genes
Ferredoxin-type protein NapG (periplasmic nitrate reductase) No genes
Nitrate ABC transporter, ATP-binding protein No genes
Nitrate ABC transporter, nitrate-binding protein PS417_14410
  PS417_20960
Nitrate ABC transporter, permease protein No genes
Nitrate reductase cytochrome c550-type subunit No genes
Nitrate/nitrite response regulator protein PS417_15740
Nitrate/nitrite sensor protein (EC 2.7.3.-) PS417_15735
Nitrate/nitrite transporter PS417_07265
  PS417_10835
  PS417_11005
  PS417_12995
  PS417_15725
  PS417_15730
  PS417_20970
Nitrite reductase [NAD(P)H] large subunit (EC 1.7.1.4) PS417_14730
Nitrite reductase [NAD(P)H] small subunit (EC 1.7.1.4) PS417_14725
Nitrite reductase probable [NAD(P)H] subunit (EC 1.7.1.4) No genes
Nitrite reductase probable electron transfer 4Fe-S subunit (EC 1.7.1.4) No genes
Nitrite transporter NirC No genes
Nitrite transporter from formate/nitrite family No genes
NrfC protein No genes
NrfD protein No genes
Periplasmic nitrate reductase component NapD No genes
Periplasmic nitrate reductase component NapE No genes
Periplasmic nitrate reductase component NapL No genes
Periplasmic nitrate reductase precursor (EC 1.7.99.4) No genes
Polyferredoxin NapH (periplasmic nitrate reductase) No genes
Putative thiol:disulfide oxidoreductase, nitrite reductase complex assembly No genes
Respiratory nitrate reductase alpha chain (EC 1.7.99.4) PS417_15720
Respiratory nitrate reductase beta chain (EC 1.7.99.4) PS417_15715
Respiratory nitrate reductase delta chain (EC 1.7.99.4) PS417_15710
Respiratory nitrate reductase gamma chain (EC 1.7.99.4) PS417_15705
Respiratory nitrate reductase subunit, conjectural (EC 1.7.99.4) No genes
Response regulator NasT PS417_20965

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