SEED Subsystem: Lysine degradation in Pseudomonas simiae WCS417

Experiments:

Role Gene Name  
5-aminopentanamidase (EC 3.5.1.30) PS417_25915
5-aminovalerate aminotransferase (EC 2.6.1.48) PS417_00900
Beta-lysine acetyltransferase (EC 2.3.1.-) No genes
Delta 1-piperideine-2-carboxylate reductase (EC 1.5.1.21) PS417_12515
Glutarate-semialdehyde dehydrogenase (EC 1.2.1.20) No genes
L-aminoadipate-semialdehyde dehydrogenase large subunit (EC 1.2.1.31) No genes
L-beta-lysine 5,6-aminomutase alpha subunit (EC 5.4.3.3) No genes
L-beta-lysine 5,6-aminomutase beta subunit (EC 5.4.3.3) No genes
L-lysine aminomutase regulator No genes
L-lysine permease PS417_28425
  PS417_03395
  PS417_04535
L-pipecolate dehydrogenase (EC 1.5.99.3) PS417_02645
L-pipecolate oxidase (1.5.3.7) PS417_02650
Lysine 2,3-aminomutase (EC 5.4.3.2) No genes
Lysine 2-monooxygenase (EC 1.13.12.2) PS417_25910
Lysine decarboxylase (EC 4.1.1.18) No genes
Lysine decarboxylase 2, constitutive (EC 4.1.1.18) No genes
Lysine decarboxylase, inducible (EC 4.1.1.18) No genes
Lysine ketoglutarate reductase (EC 1.5.1.8) (LOR) (LKR) No genes
Lysine/cadaverine antiporter membrane protein CadB No genes
Outer membrane porin, OprD family PS417_01355
  PS417_13695
  PS417_15430
  PS417_15550
  PS417_22500
  PS417_27185
  PS417_03370
  PS417_04070
Saccharopine dehydrogenase (EC 1.5.1.9) No genes
Saccharopine dehydrogenase [NAD+, L-lysine-forming] (EC 1.5.1.7) No genes
Saccharopine dehydrogenase [NADP , L-glutamate-forming] (EC 1.5.1.10) No genes
Transcriptional activator of cad operon No genes

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Or view this subsystem at the SEED (slow)