SEED Subsystem: Choline and Betaine Uptake and Betaine Biosynthesis in Pseudomonas simiae WCS417

Experiments:

Role Gene Name  
Alcohol dehydrogenase GbsB (type III ), essential for the utilization of choline (EC 1.1.1.1) No genes
Betaine aldehyde dehydrogenase (EC 1.2.1.8) PS417_26340
Choline ABC transport system, ATP-binding protein OpuBA No genes
Choline ABC transport system, choline-binding protein OpuBC No genes
Choline ABC transport system, permease protein OpuBB No genes
Choline ABC transport system, permease protein OpuBD No genes
Choline binding protein A No genes
Choline binding protein D No genes
Choline dehydrogenase (EC 1.1.99.1) PS417_10560
  PS417_26345
Choline-sulfatase (EC 3.1.6.6) PS417_00140
GbcA Glycine betaine demethylase subunit A PS417_26220
GbcB Glycine betaine demethylase subunit B PS417_26215
Glycine betaine ABC transport system permease protein No genes
Glycine betaine ABC transport system, ATP-binding protein OpuAA (EC 3.6.3.32) No genes
Glycine betaine ABC transport system, glycine betaine-binding protein OpuAC No genes
Glycine betaine ABC transport system, permease protein OpuAB No genes
Glycine betaine ABC transport system, permease/glycine betaine-binding protein OpuABC No genes
Glycine betaine transporter OpuD No genes
Glycine betaine/L-proline ABC transporter, glycine betaine/L-proline- binding/permease protein PS417_08855
HTH-type transcriptional regulator BetI PS417_26335
High-affinity choline uptake protein BetT PS417_01120
  PS417_26330
L-proline glycine betaine ABC transport system permease protein ProV (TC 3.A.1.12.1) PS417_26325
  PS417_04010
L-proline glycine betaine ABC transport system permease protein ProW (TC 3.A.1.12.1) PS417_26320
  PS417_04015
  PS417_04025
L-proline glycine betaine binding ABC transporter protein ProX (TC 3.A.1.12.1) PS417_10825
  PS417_00135
  PS417_01770
  PS417_26275
  PS417_26315
  PS417_04020
Osmotically activated L-carnitine/choline ABC transporter, ATP-binding protein OpuCA No genes
Osmotically activated L-carnitine/choline ABC transporter, permease protein OpuCB No genes
Osmotically activated L-carnitine/choline ABC transporter, permease protein OpuCD No genes
Osmotically activated L-carnitine/choline ABC transporter, substrate-binding protein OpuCC No genes
Sarcosine oxidase alpha subunit (EC 1.5.3.1) PS417_26180
Sarcosine oxidase beta subunit (EC 1.5.3.1) PS417_10910
  PS417_11550
  PS417_26190
Sarcosine oxidase delta subunit (EC 1.5.3.1) PS417_26185
Sarcosine oxidase gamma subunit (EC 1.5.3.1) PS417_26175

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