SEED Subsystem: mycolic acid synthesis in Variovorax sp. SCN45

Experiments:

Role Gene Name  
3-OXOACYL-[ACYL-CARRIER-PROTEIN] SYNTHASE III FABH (BETA-KETOACYL-ACP SYNTHASE III) (KAS III) No genes
3-oxoacyl-[acyl-carrier protein] reductase (EC 1.1.1.100) GFF1040
  GFF1065
  GFF1348
  GFF1568
  GFF1573
  GFF2104
  GFF2166
  GFF2281
  GFF2420
  GFF2421
  GFF2643
  GFF2697
  GFF2922
  GFF2967
  GFF3062
  GFF3448
  GFF3859
  GFF3976
  GFF3986
  GFF4204
  GFF4278
  GFF4286
  GFF4298
  GFF4314
  GFF4319
  GFF4357
  GFF4358
  GFF4616
  GFF4866
  GFF4965
  GFF4969
  GFF4970
  GFF4976
  GFF6068
  GFF6541
  GFF6804
  GFF6902
  GFF7056
  GFF7089
  GFF7388
  GFF84
3-oxoacyl-[acyl-carrier-protein] synthase, KASII (EC 2.3.1.41) No genes
ACETYL/PROPIONYL-CoA CARBOXYLASE (BETA SUBUNIT) ACCD6 No genes
Acyl carrier protein GFF2670
  GFF3860
CONSERVED TRANSMEMBRANE TRANSPORT PROTEIN MMPL7 No genes
CYCLOPROPANE-FATTY-ACYL-PHOSPHOLIPID SYNTHASE 1 CMAA1 (CYCLOPROPANE FATTY ACID SYNTHASE) (CFA SYNTHASE) (CYCLOPROPANE MYCOLIC ACID SYNTHASE 1) No genes
CYCLOPROPANE-FATTY-ACYL-PHOSPHOLIPID SYNTHASE 2 CMAA2 (CYCLOPROPANE FATTY ACID SYNTHASE) (CFA SYNTHASE) (CYCLOPROPANE MYCOLIC ACID SYNTHASE 2) (MYCOLIC ACID TRANS-CYCLOPROPANE SYNTHETASE) No genes
Enoyl-[acyl-carrier-protein] reductase [NADH] (EC 1.3.1.9) GFF230
FATTY-ACID-CoA LIGASE FADD26 (FATTY-ACID-COA SYNTHETASE) (FATTY-ACID-CoA SYNTHASE) No genes
METHOXY MYCOLIC ACID SYNTHASE 1 MMAA1 (METHYL MYCOLIC ACID SYNTHASE 1) (MMA1) (HYDROXY MYCOLIC ACID SYNTHASE) No genes
METHOXY MYCOLIC ACID SYNTHASE 2 MMAA2 (METHYL MYCOLIC ACID SYNTHASE 2) (MMA2) (HYDROXY MYCOLIC ACID SYNTHASE) No genes
METHOXY MYCOLIC ACID SYNTHASE 3 MMAA3 (METHYL MYCOLIC ACID SYNTHASE 3) (MMA3) (HYDROXY MYCOLIC ACID SYNTHASE) No genes
METHOXY MYCOLIC ACID SYNTHASE 4 MMAA4 (METHYL MYCOLIC ACID SYNTHASE 4) (MMA4) (HYDROXY MYCOLIC ACID SYNTHASE) No genes
MYCOLIC ACID SYNTHASE (PcaA/UmaA2) (CYCLOPROPANE SYNTHASE) No genes
Malonyl CoA-acyl carrier protein transacylase (EC 2.3.1.39) GFF1637
  GFF1640
  GFF3858
  GFF52
  GFF7451
  GFF7509
  GFF7578
  GFF7901
PHENOLPTHIOCEROL SYNTHESIS TYPE-I POLYKETIDE SYNTHASE PPSC No genes
PHENOLPTHIOCEROL SYNTHESIS TYPE-I POLYKETIDE SYNTHASE PPSD No genes
PHENOLPTHIOCEROL SYNTHESIS TYPE-I POLYKETIDE SYNTHASE PPSE No genes
POSSIBLE ACYL-[ACYL-CARRIER PROTEIN] DESATURASE DESA2 (ACYL-[ACP] DESATURASE) (STEAROYL-ACP DESATURASE) No genes
POSSIBLE CONSERVED POLYKETIDE SYNTHASE ASSOCIATED PROTEIN PAPA5 No genes
POSSIBLE LINOLEOYL-CoA DESATURASE (DELTA(6)-DESATURASE) No genes
POSSIBLE MYCOLIC ACID SYNTHASE UMAA1 No genes
PROBABLE DAUNORUBICIN-DIM-TRANSPORT ATP-BINDING PROTEIN ABC TRANSPORTER DRRA No genes
PROBABLE DAUNORUBICIN-DIM-TRANSPORT INTEGRAL MEMBRANE PROTEIN ABC TRANSPORTER DRRB No genes
PROBABLE DAUNORUBICIN-DIM-TRANSPORT INTEGRAL MEMBRANE PROTEIN ABC TRANSPORTER DRRC No genes
PROBABLE MULTIFUNCTIONAL MYCOCEROSIC ACID SYNTHASE MEMBRANE-ASSOCIATED MAS No genes
Phenolpthiocerol synthesis polyketide synthase ppsA No genes
Phenolpthiocerol synthesis polyketide synthase ppsB No genes
Probable acyl-[acyl-carrier protein] desaturase DESA1 (Acyl-[ACP] desaturase) (Stearoyl-ACP desaturase) (Protein DES) (EC 1.14.19.2) No genes
SECRETED ANTIGEN 85-A FBPA (MYCOLYL TRANSFERASE 85A) (FIBRONECTIN-BINDING PROTEIN A) (ANTIGEN 85 COMPLEX A) No genes
SECRETED ANTIGEN 85-B FBPB (85B) (ANTIGEN 85 COMPLEX B) (MYCOLYL TRANSFERASE 85B) (FIBRONECTIN-BINDING PROTEIN B) (EXTRACELLULAR ALPHA-ANTIGEN) No genes
SECRETED ANTIGEN 85-C FBPC (85C) (ANTIGEN 85 COMPLEX C) (AG58C) (MYCOLYL TRANSFERASE 85C) (FIBRONECTIN-BINDING PROTEIN C) No genes
acyl-CoA synthetase No genes

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