SEED Subsystem: Queuosine-Archaeosine Biosynthesis in Variovorax sp. SCN45

Role	Gene	Name
COG2047: Uncharacterized protein (ATP-grasp superfamily)	No genes
Dihydroneopterin triphosphate pyrophosphohydolase	No genes
Dihydroneopterin triphosphate pyrophosphohydolase type 2	GFF2550
GTP cyclohydrolase I (EC 3.5.4.16) type 1	GFF2552
	GFF7631
GTP cyclohydrolase I (EC 3.5.4.16) type 2	GFF7703
Glutamine amidotransferases class-II (GATase)	No genes
Hydrolase (HAD superfamily) in cluster with DUF1447	No genes
Inosine-uridine preferring nucleoside hydrolase (EC 3.2.2.1)	GFF2986
	GFF4588
	GFF6419
NADPH dependent preQ0 reductase	No genes
NADPH dependent preQ0 reductase-like	No genes
Peptidyl-prolyl cis-trans isomerase (EC 5.2.1.8)	GFF1326
Peptidyl-prolyl cis-trans isomerase ppiB (EC 5.2.1.8)	No genes
Permease of the drug/metabolite transporter (DMT) superfamily	GFF166
	GFF2111
	GFF2172
	GFF2857
	GFF3470
	GFF3663
	GFF4528
	GFF4622
	GFF4744
	GFF4826
	GFF5106
	GFF540
	GFF6067
	GFF6069
	GFF6535
	GFF6888
	GFF7143
	GFF7628
	GFF940
Putative preQ0 transporter	GFF4551
Queuosine Biosynthesis QueC ATPase	GFF5214
Queuosine Biosynthesis QueE Radical SAM	GFF2577
Queuosine biosynthesis QueD, PTPS-I	No genes
Radical SAM family enzyme, similar to coproporphyrinogen III oxidase, oxygen-independent, clustered with nucleoside-triphosphatase RdgB	GFF2383
S-adenosylmethionine:tRNA ribosyltransferase-isomerase (EC 5.-.-.-)	GFF5535
Substrate-specific component QueT (COG4708) of predicted queuosine-regulated ECF transporter	No genes
Substrate-specific component STY3230 of queuosine-regulated ECF transporter	No genes
archaeosine tRNA-ribosyltransferase (EC 2.4.2.-) type 1	No genes
archaeosine tRNA-ribosyltransferase (EC 2.4.2.-) type 1 like	No genes
archaeosine tRNA-ribosyltransferase (EC 2.4.2.-) type 2	No genes
archaeosine tRNA-ribosyltransferase (EC 2.4.2.-) type 5	No genes
glutamyl-Q-tRNA synthetase	GFF592
preQ1-regulated inosine-uridine nucleoside hydrolase (EC 3.2.2.1)	No genes
tRNA-guanine transglycosylase (EC 2.4.2.29)	GFF5534