SEED Subsystem: Pyrimidine utilization in Variovorax sp. SCN45

Experiments:

Role Gene Name  
Beta-ureidopropionase (EC 3.5.1.6) GFF1068
  GFF124
  GFF2449
Dihydropyrimidinase (EC 3.5.2.2) GFF2450
Dihydropyrimidine dehydrogenase [NADP+] (EC 1.3.1.2) GFF2452
Possible hydrolase or acyltransferase RutD in novel pyrimidine catabolism pathway GFF3716
Possible pyrimidine permease in reductive pathway No genes
Possible ring-opening amidohydrolase RutC in novel pyrimidine catabolism pathway No genes
Predicted amidohydrolase RutB in novel pyrimidine catabolism pathway GFF3718
Predicted flavin reductase RutF in novel pyrimidine catabolism pathway GFF3714
Predicted monooxygenase RutA in novel pyrimidine catabolism pathway GFF3719
Predicted reductase RutE in novel pyrimidine catabolism pathway GFF3715
  GFF3746
Pyridine nucleotide-disulphide oxidoreductase associated with reductive pyrimidine catabolism GFF2453
Pyrimidine ABC transporter, ATP-binding protein GFF2704
Pyrimidine ABC transporter, substrate-binding component GFF1058
Pyrimidine ABC transporter, transmembrane component 1 No genes
Pyrimidine ABC transporter, transmembrane component 2 No genes
Transcriptional regulator RutR of pyrimidine catabolism (TetR family) GFF3713
  GFF869
Uracil permease GFF3368

Or select organism:

Or view this subsystem at the SEED (slow)