SEED Subsystem: Proteolysis in bacteria, ATP-dependent in Variovorax sp. SCN45

Experiments:

Role Gene Name  
ATP-dependent Clp protease ATP-binding subunit ClpA GFF3285
  GFF341
ATP-dependent Clp protease ATP-binding subunit ClpX GFF488
ATP-dependent Clp protease adaptor protein ClpS GFF342
ATP-dependent Clp protease proteolytic subunit (EC 3.4.21.92) GFF489
  GFF6706
ATP-dependent Clp protease, ATP-binding subunit ClpC No genes
ATP-dependent hsl protease ATP-binding subunit HslU GFF4483
ATP-dependent protease HslV (EC 3.4.25.-) GFF4484
  GFF7710
ATP-dependent protease La (EC 3.4.21.53) No genes
ATP-dependent protease La (EC 3.4.21.53) Type I GFF487
  GFF7847
ATP-dependent protease La (EC 3.4.21.53) Type II No genes
ATP-dependent protease domain protein (EC 3.4.21.-) No genes
ATPase, AFG1 family No genes
ClpB protein GFF2792
  GFF3017
  GFF3283
  GFF5936
  GFF6365
  GFF7484
ClpXP protease specificity-enhancing factor GFF6698
Nucleotide excision repair protein, with UvrB/UvrC motif No genes
Outer membrane stress sensor protease DegQ, serine protease No genes
Outer membrane stress sensor protease DegS GFF1177
  GFF5365

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