SEED Subsystem: Peptidoglycan Biosynthesis in Variovorax sp. SCN45

Experiments:

Role Gene Name  
Cell division protein FtsI [Peptidoglycan synthetase] (EC 2.4.1.129) GFF4368
  GFF4479
  GFF5057
  GFF578
D-alanine--D-alanine ligase (EC 6.3.2.4) GFF4471
D-alanine--D-alanine ligase A (EC 6.3.2.4) No genes
D-alanine--D-alanine ligase B (EC 6.3.2.4) No genes
D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4) GFF1166
  GFF1728
  GFF3627
  GFF5516
Glucosamine-1-phosphate N-acetyltransferase (EC 2.3.1.157) GFF5170
Glutamate racemase (EC 5.1.1.3) GFF1274
  GFF484
Glutamine synthetase type I (EC 6.3.1.2) GFF3069
Glutamine synthetase type II, eukaryotic (EC 6.3.1.2) No genes
Glutamine synthetase type III, GlnN (EC 6.3.1.2) No genes
Glutamine synthetase, clostridia type (EC 6.3.1.2) No genes
Membrane-bound lytic murein transglycosylase B (EC 3.2.1.-) No genes
Membrane-bound lytic murein transglycosylase B precursor (EC 3.2.1.-) GFF2666
Monofunctional biosynthetic peptidoglycan transglycosylase (EC 2.4.2.-) GFF3304
  GFF4457
Multimodular transpeptidase-transglycosylase (EC 2.4.1.129) (EC 3.4.-.-) GFF3310
  GFF5318
  GFF5966
Murein-DD-endopeptidase (EC 3.4.99.-) No genes
N-acetylglucosamine-1-phosphate uridyltransferase (EC 2.7.7.23) GFF5170
N-acetylglucosamine-1-phosphate uridyltransferase eukaryotic (EC 2.7.7.23) No genes
Penicillin-binding protein 2 (PBP-2) No genes
Penicillin-binding protein 4 precursor No genes
Penicillin-binding protein PBP2a, methicillin resistance determinant MecA, transpeptidase No genes
Penicillin-insensitive transglycosylase (EC 2.4.2.-) & transpeptidase PBP-1C No genes
Phospho-N-acetylmuramoyl-pentapeptide-transferase (EC 2.7.8.13) GFF4476
Putative glutamine synthetase, Rickettsiales type (EC 6.3.1.2) No genes
Rare lipoprotein A precursor GFF2056
  GFF5442
Rod shape-determining protein RodA GFF4450
UDP-N-acetylenolpyruvoylglucosamine reductase (EC 1.1.1.158) GFF3098
UDP-N-acetylglucosamine 1-carboxyvinyltransferase (EC 2.5.1.7) GFF5343
  GFF6486
UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase (EC 2.4.1.227) GFF4473
UDP-N-acetylmuramate--alanine ligase (EC 6.3.2.8) GFF4472
UDP-N-acetylmuramoylalanine--D-glutamate ligase (EC 6.3.2.9) GFF4475
UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase (EC 6.3.2.13) GFF4478
UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanine ligase (EC 6.3.2.10) GFF2195
  GFF4477
  GFF5185

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