SEED Subsystem: Lipid A modifications in Variovorax sp. SCN45

Experiments:

Role Gene Name  
Fe(2+)/alpha-ketoglutarate-dependent dioxygenase LpxO GFF1783
Lipid A 3-O-deacylase No genes
Lipid A acylation protein PagP, palmitoyltransferase No genes
Phosphoethanolamine transferase EptA specific for the 1 phosphate group of core-lipid A GFF4041
Phosphoethanolamine transferase specific for the outer Kdo residue of lipopolysaccharide No genes
Sensor protein PhoQ (EC 2.7.13.3) No genes
Sensor protein basS/pmrB (EC 2.7.3.-) GFF12
  GFF5387
  GFF6460
Transcriptional regulatory protein PhoP No genes
Transcriptional regulatory protein basR/pmrA GFF6459
UPF0141 membrane protein YijP possibly required for phosphoethanolamine modification of lipopolysaccharide No genes

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Or view this subsystem at the SEED (slow)