SEED Subsystem: DNA-replication in Variovorax sp. SCN45

Experiments:

Role Gene Name  
ATP-dependent DNA helicase RecG (EC 3.6.1.-) GFF5538
ATP-dependent DNA helicase RecQ GFF6415
Arrested fork binding No genes
Chromosomal replication initiator protein DnaA GFF3280
  GFF3942
Crossover junction endodeoxyribonuclease RuvC (EC 3.1.22.4) GFF4462
DNA polymerase I (EC 2.7.7.7) GFF4006
DNA polymerase II (EC 2.7.7.7) GFF1455
  GFF7213
DNA polymerase III alpha subunit (EC 2.7.7.7) GFF579
  GFF678
  GFF7459
DNA polymerase III beta subunit (EC 2.7.7.7) GFF3281
DNA polymerase III chi subunit (EC 2.7.7.7) GFF239
DNA polymerase III delta prime subunit (EC 2.7.7.7) GFF32
DNA polymerase III delta subunit (EC 2.7.7.7) GFF6327
DNA polymerase III epsilon subunit (EC 2.7.7.7) GFF953
DNA polymerase III psi subunit (EC 2.7.7.7) No genes
DNA polymerase III subunits gamma and tau (EC 2.7.7.7) GFF1108
DNA polymerase III theta subunit (EC 2.7.7.7) No genes
DNA primase (EC 2.7.7.-) GFF2878
DNA primase (EC 2.7.7.-), phage-associated No genes
DNA primase TraC (EC 2.7.7.-) No genes
DNA repair protein RecN GFF2357
DNA replication protein DnaC No genes
DNA replication terminus site-binding protein No genes
Exodeoxyribonuclease V alpha chain (EC 3.1.11.5) No genes
Exodeoxyribonuclease V beta chain (EC 3.1.11.5) No genes
Exodeoxyribonuclease V gamma chain (EC 3.1.11.5) No genes
Helicase PriA essential for oriC/DnaA-independent DNA replication GFF5837
Helicase loader DnaI No genes
Holliday junction DNA helicase RuvA GFF2073
Holliday junction DNA helicase RuvB GFF2090
Primosomal protein I No genes
Primosomal replication protein N GFF2815
Primosomal replication protein N prime prime No genes
RecA protein GFF5390
Recombination protein RecR GFF1110
Replicative DNA helicase (EC 3.6.1.-) GFF2812
  GFF7956
Replicative DNA helicase (EC 3.6.1.-) [SA14-24] No genes
Single-stranded-DNA-specific exonuclease RecJ (EC 3.1.-.-) GFF6700
Transcription-repair coupling factor GFF412

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