SEED Subsystem: Branched-Chain Amino Acid Biosynthesis in Variovorax sp. SCN45

Experiments:

Role Gene Name  
(R)-citramalate synthase (EC 2.3.1.182) No genes
2-isopropylmalate synthase (EC 2.3.3.13) GFF1164
  GFF1165
3-isopropylmalate dehydratase large subunit (EC 4.2.1.33) GFF1671
  GFF1682
  GFF3890
  GFF4365
  GFF7763
3-isopropylmalate dehydratase small subunit (EC 4.2.1.33) GFF1670
  GFF1683
  GFF3889
  GFF7762
3-isopropylmalate dehydrogenase (EC 1.1.1.85) GFF3888
Acetolactate synthase large subunit (EC 2.2.1.6) GFF1158
  GFF1597
  GFF4227
  GFF4822
  GFF903
Acetolactate synthase small subunit (EC 2.2.1.6) GFF1159
Acetolactate synthase small subunit (EC 2.2.1.6), Xanthomonadales type No genes
Acetolactate synthase small subunit (EC 2.2.1.6), predicted No genes
Acetolactate synthase small subunit (EC 2.2.1.6), predicted, Archaeal type No genes
Acetolactate synthase small subunit (EC 2.2.1.6), predicted, Archaeal type 2 No genes
Branched-chain amino acid aminotransferase (EC 2.6.1.42) GFF5079
Dihydroxy-acid dehydratase (EC 4.2.1.9) GFF471
  GFF5101
  GFF687
  GFF7256
Ketol-acid reductoisomerase (EC 1.1.1.86) GFF1161
Leucine dehydrogenase (EC 1.4.1.9) GFF7936
Leucine-responsive regulatory protein, regulator for leucine (or lrp) regulon and high-affinity branched-chain amino acid transport system GFF2531
  GFF3756
  GFF5482
  GFF5506
  GFF5622
Threonine dehydratase (EC 4.3.1.19) GFF110
  GFF5624
  GFF5703
  GFF6422
  GFF6896
Threonine dehydratase biosynthetic (EC 4.3.1.19) GFF5246
Threonine dehydratase, catabolic (EC 4.3.1.19) GFF4796
  GFF7266
Valine--pyruvate aminotransferase (EC 2.6.1.66) GFF6889

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