SEED Subsystem: Oxidative stress in Variovorax sp. OAS795

Experiments:

Role Gene Name  
Alkyl hydroperoxide reductase subunit C-like protein ABID97_RS14770
  ABID97_RS15560
Catalase (EC 1.11.1.6) ABID97_RS04935
  ABID97_RS05775
DNA binding protein starved cells-like peroxide resistance protein No genes
Fe2+/Zn2+ uptake regulation proteins No genes
Ferric uptake regulation protein No genes
Ferric uptake regulation protein FUR ABID97_RS04505
Ferroxidase (EC 1.16.3.1) ABID97_RS01565
Fumarate and nitrate reduction regulatory protein No genes
Heme oxygenase HemO, associated with heme uptake No genes
Hydrogen peroxide-inducible genes activator ABID97_RS01570
  ABID97_RS07505
  ABID97_RS20675
Iron-binding ferritin-like antioxidant protein ABID97_RS01565
Iron-responsive regulator Irr No genes
Manganese superoxide dismutase (EC 1.15.1.1) No genes
Metallothionein No genes
Nitrite-sensitive transcriptional repressor NsrR No genes
NnrS protein involved in response to NO No genes
Non-specific DNA-binding protein Dps ABID97_RS01565
Organic hydroperoxide resistance protein ABID97_RS00930
  ABID97_RS24175
Organic hydroperoxide resistance transcriptional regulator ABID97_RS00925
  ABID97_RS12555
Paraquat-inducible protein A ABID97_RS15875
  ABID97_RS15880
Paraquat-inducible protein B ABID97_RS15885
Peroxidase (EC 1.11.1.7) No genes
Peroxidase/catalase HPI (EC 1.11.1.6) No genes
Peroxide stress regulator No genes
Peroxide stress regulator PerR, FUR family No genes
Phytochrome, two-component sensor histidine kinase (EC 2.7.3.-) No genes
Probable peroxiredoxin (EC 1.11.1.15) No genes
Redox-sensitive transcriptional activator SoxR No genes
Redox-sensitive transcriptional regulator (AT-rich DNA-binding protein) No genes
Regulatory protein SoxS No genes
Rubrerythrin No genes
Superoxide dismutase (EC 1.15.1.1) No genes
Superoxide dismutase [Cu-Zn] precursor (EC 1.15.1.1) No genes
Superoxide dismutase [Fe] (EC 1.15.1.1) ABID97_RS16940
Superoxide dismutase [Mn/Fe] (EC 1.15.1.1) No genes
Superoxide dismutase [Mn] (EC 1.15.1.1) ABID97_RS27710
Superoxide reductase (EC 1.15.1.2) No genes
Thioredoxin peroxidase 1 (EC 1.6.4.-) No genes
Transcriptional regulator, Crp/Fnr family No genes
Transcriptional regulator, FUR family No genes
Zinc uptake regulation protein ZUR ABID97_RS20980
bacteriophytochrome heme oxygenase BphO No genes
superoxide dismutase [Fe-Zn] (EC 1.15.1.1) No genes
transcriptional regulator, Crp/Fnr family ABID97_RS01070
  ABID97_RS03045
  ABID97_RS07820
  ABID97_RS11795
  ABID97_RS11800
  ABID97_RS17015
  ABID97_RS18055
  ABID97_RS18900
  ABID97_RS18940
  ABID97_RS26210
  ABID97_RS26995
  ABID97_RS28125
transcriptional regulator, Fur family No genes

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