SEED Subsystem: Glycine and Serine Utilization in Variovorax sp. OAS795

Experiments:

Role Gene Name  
2-amino-3-ketobutyrate coenzyme A ligase (EC 2.3.1.29) ABID97_RS25770
Aminomethyltransferase (glycine cleavage system T protein) (EC 2.1.2.10) No genes
Cystathionine beta-synthase (EC 4.2.1.22) No genes
Cystathionine gamma-lyase (EC 4.4.1.1) No genes
D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95) ABID97_RS01195
  ABID97_RS05915
  ABID97_RS07235
  ABID97_RS16995
  ABID97_RS25105
  ABID97_RS25755
  ABID97_RS25925
  ABID97_RS26890
  ABID97_RS27970
D-serine dehydratase (EC 4.3.1.18) No genes
D-serine dehydratase transcriptional activator No genes
D-serine permease DsdX No genes
D-serine/D-alanine/glycine transporter No genes
Glycerate kinase (EC 2.7.1.31) No genes
Glycine cleavage system H protein ABID97_RS19650
Glycine dehydrogenase [decarboxylating] (glycine cleavage system P protein) (EC 1.4.4.2) ABID97_RS19655
Glycine dehydrogenase [decarboxylating] (glycine cleavage system P1 protein) (EC 1.4.4.2) No genes
Glycine dehydrogenase [decarboxylating] (glycine cleavage system P2 protein) (EC 1.4.4.2) No genes
L-serine dehydratase (EC 4.3.1.17) No genes
L-serine dehydratase 1 (EC 4.3.1.17) No genes
L-serine dehydratase, alpha subunit (EC 4.3.1.17) No genes
L-serine dehydratase, beta subunit (EC 4.3.1.17) No genes
Monoamine oxidase (1.4.3.4) No genes
Phosphoserine aminotransferase (EC 2.6.1.52) ABID97_RS09520
Phosphoserine phosphatase (EC 3.1.3.3) ABID97_RS12680
  ABID97_RS17290
  ABID97_RS19530
Serine hydroxymethyltransferase (EC 2.1.2.1) ABID97_RS17890
Serine transporter No genes
Seryl-tRNA synthetase (EC 6.1.1.11) No genes
Threonine dehydratase, catabolic (EC 4.3.1.19) ABID97_RS20330

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