SEED Subsystem: Photorespiration (oxidative C2 cycle) in Sphingobium sp. HT1-2

Experiments:

Role Gene Name  
2-hydroxy-3-oxopropionate reductase (EC 1.1.1.60) GFF1491
  GFF1528
  GFF2728
2-oxoglutarate/malate translocator No genes
Aminomethyltransferase (glycine cleavage system T protein) (EC 2.1.2.10) GFF1923
Catalase (EC 1.11.1.6) GFF415
  GFF4719
  GFF5112
  GFF5316
  GFF639
D-Lactate dehydrogenase, cytochrome c-dependent (EC 1.1.2.4) No genes
D-glycerate 3-kinase (EC 2.7.1.31), plant type GFF2483
Dihydrolipoamide dehydrogenase (EC 1.8.1.4) GFF4978
Expressed protein possibly involved in photorespiration No genes
Glycerate kinase (EC 2.7.1.31) No genes
Glycine cleavage system H protein GFF1922
Glycine dehydrogenase [decarboxylating] (glycine cleavage system P protein) (EC 1.4.4.2) No genes
Glycine dehydrogenase [decarboxylating] (glycine cleavage system P1 protein) (EC 1.4.4.2) GFF1921
Glycine dehydrogenase [decarboxylating] (glycine cleavage system P2 protein) (EC 1.4.4.2) GFF1920
Glycolate dehydrogenase (EC 1.1.99.14), FAD-binding subunit GlcE No genes
Glycolate dehydrogenase (EC 1.1.99.14), iron-sulfur subunit GlcF No genes
Glycolate dehydrogenase (EC 1.1.99.14), subunit GlcD No genes
Glycolate oxidase (EC 1.1.3.15) No genes
Glycolate permease No genes
Glyoxylate carboligase (EC 4.1.1.47) No genes
Hydroxypyruvate reductase (EC 1.1.1.81) GFF2300
L-alanine:glyoxylate aminotransferase (EC 2.6.1.44) No genes
Malate synthase (EC 2.3.3.9) No genes
Malate synthase G (EC 2.3.3.9) GFF1658
Malyl-CoA lyase (EC 4.1.3.24) GFF3835
Phosphoglycolate phosphatase (EC 3.1.3.18) GFF2443
Ribulose bisphosphate carboxylase (EC 4.1.1.39) No genes
Ribulose bisphosphate carboxylase large chain (EC 4.1.1.39) No genes
Ribulose bisphosphate carboxylase small chain (EC 4.1.1.39) No genes
Ribulose-1,5-bisphosphate carboxylase, Type III (EC 4.1.1.39) No genes
Serine hydroxymethyltransferase (EC 2.1.2.1) GFF3900
Serine--glyoxylate aminotransferase (EC 2.6.1.45) No genes

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