SEED Subsystem: Acetyl-CoA fermentation to Butyrate in Sphingobium sp. HT1-2

Experiments:

Role Gene Name  
3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35) GFF1394
  GFF1580
  GFF4746
  GFF5121
3-hydroxybutyrate dehydrogenase (EC 1.1.1.30) No genes
3-hydroxybutyryl-CoA dehydratase (EC 4.2.1.55) No genes
3-hydroxybutyryl-CoA dehydrogenase (EC 1.1.1.157) GFF4893
3-hydroxybutyryl-CoA epimerase (EC 5.1.2.3) GFF1394
  GFF1580
  GFF5121
Acetoacetate metabolism regulatory protein AtoC No genes
Acetoacetyl-CoA reductase (EC 1.1.1.36) GFF2893
Acetyl-CoA acetyltransferase (EC 2.3.1.9) GFF1374
  GFF141
  GFF5122
Acetyl-CoA:acetoacetyl-CoA transferase, alpha subunit (EC 2.8.3.8) No genes
Acetyl-CoA:acetoacetyl-CoA transferase, beta subunit (EC 2.8.3.8) No genes
Butyrate kinase (EC 2.7.2.7) No genes
Butyrate-acetoacetate CoA-transferase subunit A (EC 2.8.3.9) No genes
Butyrate-acetoacetate CoA-transferase subunit B (EC 2.8.3.9) No genes
Butyryl-CoA dehydrogenase (EC 1.3.99.2) GFF1369
  GFF1373
  GFF2878
  GFF3635
  GFF4615
  GFF4882
  GFF4933
  GFF5123
  GFF925
  GFF930
  GFF932
  GFF933
Electron transfer flavoprotein, alpha subunit GFF1705
  GFF4742
Electron transfer flavoprotein, beta subunit GFF1706
  GFF4743
Electron transfer flavoprotein-ubiquinone oxidoreductase (EC 1.5.5.1) GFF93
Enoyl-CoA hydratase (EC 4.2.1.17) GFF1379
  GFF1394
  GFF1404
  GFF1408
  GFF1547
  GFF1867
  GFF2444
  GFF4618
  GFF4934
  GFF5103
  GFF5121
  GFF893
  GFF917
  GFF922
Ferredoxin-like protein No genes
Ferredoxin-like protein FixX No genes
Ferredoxin-like protein YdiT No genes
Ferredoxin-like protein YgcO No genes
Probable electron transfer flavoprotein-quinone oxidoreductase FixC (EC 1.5.5.-) No genes
phosphotransbutyrylase (EC 2.3.1.19) No genes

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