SEED Subsystem: DNA Repair Base Excision in Ralstonia solanacearum PSI07

Experiments:

Role Gene Name  
ATP-dependent DNA ligase (EC 6.5.1.1) No genes
ATP-dependent DNA ligase (EC 6.5.1.1) LigC No genes
ATP-dependent DNA ligase (EC 6.5.1.1) clustered with Ku protein, LigD RPSI07_RS21105
DNA ligase (EC 6.5.1.2) RPSI07_RS17130
DNA polymerase I (EC 2.7.7.7) RPSI07_RS13480
DNA polymerase II (EC 2.7.7.7) No genes
DNA-3-methyladenine glycosylase (EC 3.2.2.20) RPSI07_RS02490
DNA-3-methyladenine glycosylase II (EC 3.2.2.21) RPSI07_RS12040
  RPSI07_RS18370
Endonuclease III (EC 4.2.99.18) RPSI07_RS19265
Endonuclease VIII No genes
Exodeoxyribonuclease I (EC 3.1.11.1) RPSI07_RS09480
Flap structure-specific endonuclease (EC 3.-.-.-) No genes
Formamidopyrimidine-DNA glycosylase (EC 3.2.2.23) RPSI07_RS22175
Ku domain protein RPSI07_RS21100
Single-stranded-DNA-specific exonuclease RecJ (EC 3.1.-.-) RPSI07_RS18620
Single-stranded-DNA-specific exonuclease RecJ, clostridial paralog No genes
Single-stranded-DNA-specific exonuclease RecJ, cyanobacterial paralog No genes
Uracil-DNA glycosylase, family 1 RPSI07_RS10725

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