SEED Subsystem: Coenzyme B12 biosynthesis in Ralstonia solanacearum PSI07

Experiments:

Role Gene Name  
5,6-dimethylbenzimidazole synthase, flavin destructase family No genes
ATPase component CbiO of energizing module of cobalt ECF transporter No genes
Additional lipoprotein component of predicted cobalamin ECF transporter No genes
Additional substrate-specific component CbiN of cobalt ECF transporter No genes
Adenosylcobinamide amidohydrolase (EC 3.5.1.90) No genes
Adenosylcobinamide-phosphate guanylyltransferase (EC 2.7.7.62) RPSI07_RS12920
Adenosylcobinamide-phosphate synthase No genes
Aerobic cobaltochelatase CobS subunit (EC 6.6.1.2) No genes
Aerobic cobaltochelatase CobT subunit (EC 6.6.1.2) No genes
Alpha-ribazole-5'-phosphate phosphatase (EC 3.1.3.73) RPSI07_RS12900
CblX, a non-orthologous displasment for Alpha-ribazole-5'-phosphate phosphatase No genes
CblY, a non-orthologous displasment for Alpha-ribazole-5'-phosphate phosphatase No genes
CblZ, a non-orthologous displasment for Alpha-ribazole-5'-phosphate phosphatase No genes
ChlD component of cobalt chelatase involved in B12 biosynthesis RPSI07_RS02245
ChlI component of cobalt chelatase involved in B12 biosynthesis RPSI07_RS02245
Cob(I)alamin adenosyltransferase (EC 2.5.1.17) RPSI07_RS02200
Cob(I)alamin adenosyltransferase PduO (EC 2.5.1.17) No genes
Cob(II)alamin reductase No genes
CobN component of cobalt chelatase involved in B12 biosynthesis RPSI07_RS02250
CobW GTPase involved in cobalt insertion for B12 biosynthesis RPSI07_RS02205
Cobalamin biosynthesis protein CbiG RPSI07_RS02215
Cobalamin biosynthesis protein CobG No genes
Cobalamin synthase No genes
Cobalamine-related hypothetical metal-binding protein CrdX No genes
Cobalt-precorrin-2 C20-methyltransferase (EC 2.1.1.130) RPSI07_RS02225
Cobalt-precorrin-3b C17-methyltransferase RPSI07_RS02210
Cobalt-precorrin-4 C11-methyltransferase (EC 2.1.1.133) RPSI07_RS02220
Cobalt-precorrin-6 synthase, anaerobic RPSI07_RS02230
Cobalt-precorrin-6x reductase (EC 1.3.1.54) RPSI07_RS02210
Cobalt-precorrin-6y C15-methyltransferase [decarboxylating] (EC 2.1.1.-) No genes
Cobalt-precorrin-6y C5-methyltransferase (EC 2.1.1.-) RPSI07_RS02240
Cobalt-precorrin-8x methylmutase (EC 5.4.1.2) RPSI07_RS02235
Cobyric acid synthase No genes
Cobyrinic acid A,C-diamide synthase RPSI07_RS02195
Duplicated ATPase component CbrU of energizing module of predicted cobalamin ECF transporter No genes
HoxN/HupN/NixA family cobalt transporter RPSI07_RS02260
HupE-UreJ family cobalt transporter No genes
L-threonine 3-O-phosphate decarboxylase (EC 4.1.1.81) RPSI07_RS12910
Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase (EC 2.4.2.21) RPSI07_RS12890
Optional hypothetical component of the B12 transporter BtuM No genes
Optional hypothetical component of the B12 transporter BtuN No genes
Outer membrane vitamin B12 receptor BtuB RPSI07_RS04045
  RPSI07_RS12875
Precorrin-6A synthase (EC 2.1.1.152) No genes
Predicted adenosylcobinamide-phosphate guanylyltransferase CobY (EC 2.7.7.62) No genes
Predicted alpha-ribazole-5'-phosphate phosphatase CobZ (EC 3.1.3.73) No genes
Predicted alpha-ribazole-5-phosphate synthase CblS for cobalamin biosynthesis No genes
Predicted cobalt ABC transporter periplasmic component No genes
Predicted cobalt transporter CbtA No genes
Predicted cobalt transporter CbtC No genes
Predicted cobalt transporter in Bacteroides_Porphyromonas No genes
Predicted cobalt transporter in Mycobacteria No genes
Predicted cobalt transporter in Thermoplasma No genes
Predicted cobalt transporter in sulfate-reducing delta-proteobacteria No genes
Putative 2Fe-2S ferredoxin CbiW involved in B12 biosynthesis RPSI07_RS02255
Sirohydrochlorin cobaltochelatase (EC 4.99.1.3) RPSI07_RS02235
  RPSI07_RS12810
Sirohydrochlorin cobaltochelatase CbiK (EC 4.99.1.3) No genes
Substrate-specific component CbiM of cobalt ECF transporter No genes
Substrate-specific component CblT of predicted B12-regulated ECF transporter for dimethylbenzimidazole No genes
Substrate-specific component CbrT of predicted cobalamin ECF transporter No genes
Threonine kinase in B12 biosynthesis No genes
Transmembrane component CbiQ of energizing module of cobalt ECF transporter No genes
Transmembrane component CbrV of energizing module of predicted cobalamin ECF transporter No genes
Uroporphyrinogen-III methyltransferase (EC 2.1.1.107) RPSI07_RS12800
Vitamin B12 ABC transporter, ATPase component BtuD No genes
Vitamin B12 ABC transporter, B12-binding component BtuF RPSI07_RS12905
Vitamin B12 ABC transporter, permease component BtuC RPSI07_RS12880

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